Gene
| Gene Model ID | pfu_aug1.0_2211.1_44282 |
|---|---|
| Locus | scaffold2211.1 : 74670 ... 83215 : - |
| To GenomeBrowser | scaffold2211.1:74670..83215 |
| Genes list of scaffold | scaffold2211.1 |
| Synonym | pfu_aug2.0_1083.1_11421 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2211.1_44282.t1 | 2 | 1 | fn3 | 12 | 86 | 4.0e-09 | 36.4 | 1.3e-12 | 4.0e-09 | 36.4 |
| pfu_aug1.0_2211.1_44282.t1 | 2 | 2 | fn3 | 161 | 183 | 4.0e-09 | 36.4 | 0.81 | 2400.0 | -1.3 |
Transcript
| Transcript ID | pfu_aug1.0_2211.1_44282.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2211.1_44282.t1 atggcgtccagcatccctccaacatatctggaatcggtaaatgtggagtcgtccaccacaacttctatacatttgacgtg gcaaataagtgacgatctttctgcttacgtcagaggtttccgcgtacattatcagaaagaggccagtaaatatgtacagt acggaccgctcttatcaaggtcatcatcatcatttgacatcacaaatctcgtcgccgacaccttctataaagtgtgcctt gttatgtacaaaaacgacacttcgccgatgcgacaatgcgtcggcgcatctacaacgaattggagacttcctgtttccat ctctatcggcagcagtattggagcggtgttagcgctgtctatgatcgtaattttggtgctcgctgtagcaaggtgcccgt ttgttttcaaattccaaaagaataagaaaaggtatgtttcaaggaaatatgacagcatgtcttcgcatttcacgtacgac ttcagcgatacggtaacgcatgacccggatgaatacatatcagaagatttagaacatagttcacattacgatacaaccca tcataacaagcaaatggaacaggaatgtgactgcaacaaaaagaaatcgaatctgaaacataaatgtaacggaggtgtcc gaccgaaaataccgcctcccgcgcaaagacgacagcggtcgtatatttctcaaactaaggaggtttactcatccacagaa tcccaacctcctgtttatcctcatcgttatgacaaagggaacacaaacgagaattataacatcgatgttgattgtcctca gtgtatgtattcaaataatgagactgctgggattggaaattatatcccagaatgcaattgtgaaaactgtttgaatatga atagaacagccgaagaggtaatgtgtcagcaatgtgaacatgacggttctattgttttacatctggaaccaaacaactct ttccacagtttgcaggaaaatatgcaagctcaagcaatgtctccagactgtaatttggcgagagattcaaataattcagg ggaaaataactctgatccatataaaacttggtgtgatcgtagacgatcgtcaagtccgaaaatggtgttgctgtatttgt aa |
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Protein
| Protein ID | pfu_aug1.0_2211.1_44282.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2211.1_44282.t1 MASSIPPTYLESVNVESSTTTSIHLTWQISDDLSAYVRGFRVHYQKEASKYVQYGPLLSRSSSSFDITNLVADTFYKVCL VMYKNDTSPMRQCVGASTTNWRLPVSISIGSSIGAVLALSMIVILVLAVARCPFVFKFQKNKKRYVSRKYDSMSSHFTYD FSDTVTHDPDEYISEDLEHSSHYDTTHHNKQMEQECDCNKKKSNLKHKCNGGVRPKIPPPAQRRQRSYISQTKEVYSSTE SQPPVYPHRYDKGNTNENYNIDVDCPQCMYSNNETAGIGNYIPECNCENCLNMNRTAEEVMCQQCEHDGSIVLHLEPNNS FHSLQENMQAQAMSPDCNLARDSNNSGENNSDPYKTWCDRRRSSSPKMVLLYL |
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