Gene
| Gene Model ID | pfu_aug1.0_2213.1_44287 |
|---|---|
| Locus | scaffold2213.1 : 19598 ... 30695 : - |
| To GenomeBrowser | scaffold2213.1:19598..30695 |
| Genes list of scaffold | scaffold2213.1 |
| Synonym | pfu_aug2.0_85.1_16881 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2213.1_44287.t1 | 3 | 1 | SNF | 1 | 94 | 0.0 | 352.6 | 3.4e-34 | 5.1e-30 | 104.4 |
| pfu_aug1.0_2213.1_44287.t1 | 3 | 2 | SNF | 150 | 338 | 0.0 | 352.6 | 0.0 | 0.0 | 248.7 |
| pfu_aug1.0_2213.1_44287.t1 | 3 | 3 | SNF | 338 | 386 | 0.0 | 352.6 | 0.00018 | 2.6 | 6.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 3 |
Transcript
| Transcript ID | pfu_aug1.0_2213.1_44287.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2213.1_44287.t1 atgttgatcattgctggcttaccgttgtttttcttcgagttgaatctcggacagttcgcatctgaaggtccaattacagt atggaaagtcaagcctctctttatgggaattggttggggtatggtatccatcagtggaatggtcagtatgtactataacg tcatcatcatgtactccatctactacatgttcgtgtcatttgttaaccttgacgacacgttgccatggcaaacatgtgga aattcatggaataccgatgaatgcaggacggaggcgtatcccgacatcgagaacgcttataatgagactgtaaagattga catgttgatgagtttgaaatccatgtcatgtttgaattccactgcaacattcaacaaattatcaacacagttcaatatga ctttcaacagttttgctcagtactactcaaactcgacttatttagaaaattacgaagcttgtgacatcaaattccgtaca gctagcgaggaatactggacacgttacgtcttacgcttgcacgaggctgagccagaccgtctgtacgacatcggtgacgt cagtctgaagaatatactctgcttgttggtggcctgggtcttcgtcttcttctgtctaatgaagggtgtaaaatcatcag gaaaggttgtatacttcaccgctaccttcccatacgttgtattggtcattttgttgattagaggagtgactttagagggc tacatgaggggaattgacttctatatcacaccaaagtggcacttgctaaaagatccaaaggtatggggtgatgccgccac tcagatcttctactcgttaggtccagcttttggaggactgttaaccatgtcaagctacaataagtttaaaaacaatacgt tcagagatgctatgttggtatcgtttattaactgtggaaccagtgtgttcgcgggctttgccgtattctccctacttggt cacatgtcactcgtcaccaacagacctgtagaggaagtagccgactcagtaattatggcagctgttttctatacccccgc ctattatgatcgccatgacgggcggtactctttcccgccttttgctgaaggcgtaggttggatgatggtttgtctgccat tgctacttattattggtacagcgatattccaggctgttaaatatggaggaataatgaatgctatgaaacctgaccccaca tggggccctgcccttgactcggacagaacagggcggtaccagccaatccacggtcaggagtttgacgacatccagaacgg caccaccaacatgggatatataccggaaaaagagaaaggtggaccatacatggttagcggaaactcatacaaccagaaaa tgtag |
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Protein
| Protein ID | pfu_aug1.0_2213.1_44287.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2213.1_44287.t1 MLIIAGLPLFFFELNLGQFASEGPITVWKVKPLFMGIGWGMVSISGMVSMYYNVIIMYSIYYMFVSFVNLDDTLPWQTCG NSWNTDECRTEAYPDIENAYNETVKIDMLMSLKSMSCLNSTATFNKLSTQFNMTFNSFAQYYSNSTYLENYEACDIKFRT ASEEYWTRYVLRLHEAEPDRLYDIGDVSLKNILCLLVAWVFVFFCLMKGVKSSGKVVYFTATFPYVVLVILLIRGVTLEG YMRGIDFYITPKWHLLKDPKVWGDAATQIFYSLGPAFGGLLTMSSYNKFKNNTFRDAMLVSFINCGTSVFAGFAVFSLLG HMSLVTNRPVEEVADSVIMAAVFYTPAYYDRHDGRYSFPPFAEGVGWMMVCLPLLLIIGTAIFQAVKYGGIMNAMKPDPT WGPALDSDRTGRYQPIHGQEFDDIQNGTTNMGYIPEKEKGGPYMVSGNSYNQKM |
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