Gene
| Gene Model ID | pfu_aug1.0_2229.1_15736 |
|---|---|
| Locus | scaffold2229.1 : 298 ... 5565 : - |
| To GenomeBrowser | scaffold2229.1:298..5565 |
| Genes list of scaffold | scaffold2229.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2229.1_15736.t1 | 2 | 1 | Formyl_trans_N | 65 | 176 | 1.5e-18 | 66.9 | 3.0e-20 | 6.3e-17 | 61.6 |
| pfu_aug1.0_2229.1_15736.t1 | 1 | 1 | AMP-binding | 593 | 998 | 0.0 | 262.9 | 0.0 | 0.0 | 262.4 |
| pfu_aug1.0_2229.1_15736.t1 | 2 | 1 | Epimerase | 859 | 882 | 1.3e-07 | 31.3 | 0.14 | 300.0 | 0.6 |
| pfu_aug1.0_2229.1_15736.t1 | 1 | 1 | AMP-binding_C | 1006 | 1081 | 5.7e-10 | 40.0 | 9.3e-13 | 2.0e-09 | 38.2 |
| pfu_aug1.0_2229.1_15736.t1 | 1 | 1 | PP-binding | 1114 | 1178 | 1.1e-08 | 35.2 | 1.1e-11 | 2.3e-08 | 34.1 |
| pfu_aug1.0_2229.1_15736.t1 | 2 | 2 | Formyl_trans_N | 1246 | 1300 | 1.5e-18 | 66.9 | 0.042 | 88.0 | 2.5 |
| pfu_aug1.0_2229.1_15736.t1 | 2 | 2 | Epimerase | 1246 | 1454 | 1.3e-07 | 31.3 | 8.2e-10 | 1.7e-06 | 27.6 |
| pfu_aug1.0_2229.1_15736.t1 | 1 | 1 | NAD_binding_4 | 1248 | 1487 | 0.0 | 168.7 | 0.0 | 0.0 | 168.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2229.1_15736.t1 | gi|254496714|ref|ZP_05109576.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2229.1_15736.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2229.1_15736.t1 atgccaaagaaaaaccttcctgttattgacaaaggtacacacaaaaggattacctgtgctgttattggtgatggaaacat cttgctgagctgcttgaagatactgaaagaagctggattcattatatcacaagtgtttacaaacacttcttcagtggttt tatattgcgatgaaatctccatttcttatagcagaaggaatgcaaatatagaggactcattatgtggaaaggagatagac tatttgttcagtatatgtaatcaaagaattctgagtaaatcagagctttctataccgagacaatttgcaatcaattacca tgactctcctcttccttcatatgctggggttcaagcaacaagttgggcaattctaaatggagaaaaagaacatggcatca gctggcacgtggttgaagctggaatcgatacaggtgacattgtacagttccgagctgtttcgatccaaaaagaagactca gccttaagtttaaacctaaaatgtaaagaggcagcgttgaacgcattcgccactcttatcaaagacttacaggaccaaaa tgttaagcggaaagttcaaagcaagttgggacggtcttattacggactttatgctattcctccgaatcttgggattttga gttttgaaaaatctacctctgaactttacgacctcgcaagagctcttgagttcggaaatcatgaaaatgcattaggaagt ccgaagatattatcgaatacgggtgaattcttcttggtgacaaactcagtagaagggtctagtgatacttccattgatgg aaatgcccttatgggcacaattttagaagtatttgatgactcattacgtgtcaaaactggtgatggatcactgtggatat ccctagcgcaatctgatggcggtcatctgtcgacttttgatttcaagaaacatggattgtcagaaggaaaaagattagca acacattttgctgctgatacttcggaagtggttgatataaggaaaaaagaaaacttttggcgaagaaaattagaaaaata tgacccgaccgtatttttccgccaacgaatgaatgtcgttactggtatcatagatgtatcagatgaaccaaacatcgaaa caacagaaatagctctcccaaattaccaaaacatttatgatatcgaagcttcttttgtctcgttccttagtaggacctgt tgcacatcatctgttaatgtcgggatcttagcaaacatgaaggacgttccggagaatataaatggtatttatgtcgatgt atgccctacaattattgagatagatatgaatgaaacagtaggaatggtcgtcgaaaagtgcaaacaggatctattgaaac acagggaggcaaaaacatttttggtggatgtcttctatcgatatccggagttaaggggtcgaaaacaaactccacaccat aacatcgtaatcggagaagcaattccttcgaacaacaagagaatgtatgtacaacttcttcttcacgaatgtaacattct tttacttttctctggggataaagttcaagtgctgtacaataaaagaccaggtcaagatttcagacatataatggacgttc tgaaacacttcccgacttttatgacgtccattgaaaaatcgaaaaatacaccactttcgaaagtgaccctgctgtccagt tttcagattgaaagattgtataaaggaaaattcgaacgccaagaaaatgatatacagcttttcgatgaagttaagaagaa agccttgtcattcgacacaaaaactgcactgatgacgtcaatgacatccttatcgtatgcagaaatgctcgaatgcattt atcagttttccagtattctagaagcttcagcagaaaacgggaaaaggagagtgataggccttcatctaccaaactcaatc aggtacgtggtgtcgatgctgtcagttataaacataggacatgcttttttacctcttcctatggactacccattagaaag aataacttttatcttgcatgattcaaatgttacaacagttgttacaactaaagaagtggagaagtccctacagtgcatgt catctaagatcaaattatcagccttaaacacagcaaagatctttggtgaggaagttgttatcctgcgagcgattcatcaa gcagaagtgcttacagatgaagcagaatgtcctaatttcattcttcctgccaacacagcttatgtgatgtacacatcagg ttctactggaaagcccaaaggagtaagcgtaccacagaatgctgttagtaacctagcatatgcacaaatttacttatggg acctcaacgttaaagagatcattggccagtttgcgtctattggattcgatgcgacgatttcagaaatttttaccgctttg atatcaggtgccactttggcgattttctcagagaatgagcgacttggacatgaattcatttctgcagttaacaacatgca aatcaacacaataacgcttccaccgtctgtcttgaacatctgtggacctggcgacatgcctaagctaaagaaagttatca ccgccggtgaagcatgcaccgtcagcacggcgatgaagtggacgtcagggacgaacatacgattcttcaacgcatatgga ccaactgaaacgacagtatgcgcaacatgttacgaattcaacgtctctccggataatgaggaggtcaacccggaactatc aatcggcaaagcaattcctggagcctatgtctgcttgcttgatgacttccaacagcctgtccctccctatgtgattggcg aaatatacattggagggaaaggattatctaatggttatatcggtcatgcgaaacattttaacgagacaaagttcattcaa aatcctttctgctcctcggaaatgcttctgtataaaacgggggaccatgcatttcaagacagcgacgggaatattacttt cgttggtagacttgacgacatggtgaaaatacgtggacagagagttaaccttgccgagatcgaaaacatcataattcaac atccaaaagtagaaatagcagttgttgtactacacaaatgtaaaaagtcgaacgaggtattcatcgctgcctacgcggct ccaacatttatatacctttcagagctgaaagagtatttggttaaagttcttcctcgatacatgatcccgactttcatttc gaaattagagaaagatcagtttcctttgactctgagtggaaaaatagaccgcaaggcccttgaaagagatgaatcagtac atgaaagaattacggtttcctcggtctcgaaatctcgtcttaacgagacccagctagcgatttcgaaactgtggtgcaaa gttttaaacatggatgaatcaatggtatatacttttcacaggcaatcatctttcagtgagcttggtggaaattctctcca attagtccttctacaaagagctttccaggatgatttgggcatgaacctgtctttcacagacattggtacagcggatacta tatcagagtttgagaatgtggtaaaaaggaaacaagatgcaaacagaaaacaaggatataaccaacatataaacgatgag acattgagaaagatgattattgaagattcaatccttcaagatcatgaagtaccatatcactccagaaaatgctcagtgca gtttcagcatttcagatcattgcattacaagtcggatatgaattatcctaagaatgtattgatttctggagtcactggat ttctaggagcttatcttctaacagaaattttagagcaaactaatgcgcatgtttgctgcatggtacgagagactaccgag gcaagagggttagacagaattagggaaaatatgaaaaaatacaatctgtggaaattcgaatattcacaaagaattgctat tgtcatctcagatctgtcacaaccaaagttaggcatagcatctgacatatataaagagctcactcaagcggtcgatgccg tggtcatgaacgctgctcagatgaatttcaatacaggatatgaagatcatcgtaccgcaaacgtacaaagtacgaaggaa tttatttcattcgctatgacaggtgttcaaaagcgaattttcacaacgtcttctcttggagtattcctctttccaaaagc agatgatccacctcacatggtttactatgagaatgactttctcgatgatccactgcagattgctggtggttacggacgaa gcaaatgggcaagtgagaagctgatcatgcaagcatttgactatctgcccagtggagccatttttaggccagctagaata tccggctgctcaacagacggacatggtccaaaaaacgatctgtttgctaccacaatcctgggaatgaagagactaggatg cttccctgatatggactttccatttgatttgacacctgttgattatgtcgctaaagcaatggttgaaatcttggttaaaa tctgcaacgataattcaaatcatgaaaaaatctacaatctcttcaatcagcatactttgccttttaacgagctgtttgat ggaatgggtcttcaaggttaccctcttgaggagtggagacaaaagctattacaagcaccagaggaaaacaaggagcttat tccgttgacacccttctttatgtcacctttctgggataggtccccaacctggccaatttttgacacgtccaacacagaca gtatgataagtgactcgaccaaacgcattctaagacctagtagggaattactggaagtttataagaaatatttcgaagta taa |
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Protein
| Protein ID | pfu_aug1.0_2229.1_15736.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2229.1_15736.t1 MPKKNLPVIDKGTHKRITCAVIGDGNILLSCLKILKEAGFIISQVFTNTSSVVLYCDEISISYSRRNANIEDSLCGKEID YLFSICNQRILSKSELSIPRQFAINYHDSPLPSYAGVQATSWAILNGEKEHGISWHVVEAGIDTGDIVQFRAVSIQKEDS ALSLNLKCKEAALNAFATLIKDLQDQNVKRKVQSKLGRSYYGLYAIPPNLGILSFEKSTSELYDLARALEFGNHENALGS PKILSNTGEFFLVTNSVEGSSDTSIDGNALMGTILEVFDDSLRVKTGDGSLWISLAQSDGGHLSTFDFKKHGLSEGKRLA THFAADTSEVVDIRKKENFWRRKLEKYDPTVFFRQRMNVVTGIIDVSDEPNIETTEIALPNYQNIYDIEASFVSFLSRTC CTSSVNVGILANMKDVPENINGIYVDVCPTIIEIDMNETVGMVVEKCKQDLLKHREAKTFLVDVFYRYPELRGRKQTPHH NIVIGEAIPSNNKRMYVQLLLHECNILLLFSGDKVQVLYNKRPGQDFRHIMDVLKHFPTFMTSIEKSKNTPLSKVTLLSS FQIERLYKGKFERQENDIQLFDEVKKKALSFDTKTALMTSMTSLSYAEMLECIYQFSSILEASAENGKRRVIGLHLPNSI RYVVSMLSVINIGHAFLPLPMDYPLERITFILHDSNVTTVVTTKEVEKSLQCMSSKIKLSALNTAKIFGEEVVILRAIHQ AEVLTDEAECPNFILPANTAYVMYTSGSTGKPKGVSVPQNAVSNLAYAQIYLWDLNVKEIIGQFASIGFDATISEIFTAL ISGATLAIFSENERLGHEFISAVNNMQINTITLPPSVLNICGPGDMPKLKKVITAGEACTVSTAMKWTSGTNIRFFNAYG PTETTVCATCYEFNVSPDNEEVNPELSIGKAIPGAYVCLLDDFQQPVPPYVIGEIYIGGKGLSNGYIGHAKHFNETKFIQ NPFCSSEMLLYKTGDHAFQDSDGNITFVGRLDDMVKIRGQRVNLAEIENIIIQHPKVEIAVVVLHKCKKSNEVFIAAYAA PTFIYLSELKEYLVKVLPRYMIPTFISKLEKDQFPLTLSGKIDRKALERDESVHERITVSSVSKSRLNETQLAISKLWCK VLNMDESMVYTFHRQSSFSELGGNSLQLVLLQRAFQDDLGMNLSFTDIGTADTISEFENVVKRKQDANRKQGYNQHINDE TLRKMIIEDSILQDHEVPYHSRKCSVQFQHFRSLHYKSDMNYPKNVLISGVTGFLGAYLLTEILEQTNAHVCCMVRETTE ARGLDRIRENMKKYNLWKFEYSQRIAIVISDLSQPKLGIASDIYKELTQAVDAVVMNAAQMNFNTGYEDHRTANVQSTKE FISFAMTGVQKRIFTTSSLGVFLFPKADDPPHMVYYENDFLDDPLQIAGGYGRSKWASEKLIMQAFDYLPSGAIFRPARI SGCSTDGHGPKNDLFATTILGMKRLGCFPDMDFPFDLTPVDYVAKAMVEILVKICNDNSNHEKIYNLFNQHTLPFNELFD GMGLQGYPLEEWRQKLLQAPEENKELIPLTPFFMSPFWDRSPTWPIFDTSNTDSMISDSTKRILRPSRELLEVYKKYFEV |
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