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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2229.1_15737
Locus scaffold2229.1 : 11992 ... 33165 : -
To GenomeBrowser scaffold2229.1:11992..33165
Genes list of scaffold scaffold2229.1
Synonym pfu_aug2.0_735.1_17780

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2229.1_15737.t1 1 1 p450 99 349 1.1e-25 90.1 1.8e-28 2.5e-25 88.9
pfu_aug1.0_2229.1_15737.t1 1 1 Mab-21 564 740 6.2e-33 114.1 1.0e-35 1.4e-32 113.0
pfu_aug1.0_2229.1_15737.t1 2 1 Formyl_trans_N 884 994 2.6e-19 69.4 7.2e-21 9.8e-18 64.3
pfu_aug1.0_2229.1_15737.t1 1 1 AMP-binding 1413 1819 0.0 262.7 0.0 0.0 261.9
pfu_aug1.0_2229.1_15737.t1 2 1 Epimerase 1682 1703 1.7e-06 27.6 0.36 480.0 -0.1
pfu_aug1.0_2229.1_15737.t1 1 1 AMP-binding_C 1827 1902 3.2e-11 44.0 7.0e-14 9.5e-11 42.4
pfu_aug1.0_2229.1_15737.t1 1 1 PP-binding 1935 2001 8.5e-10 38.7 1.4e-12 1.9e-09 37.6
pfu_aug1.0_2229.1_15737.t1 2 2 Formyl_trans_N 2067 2122 2.6e-19 69.4 0.096 130.0 2.0
pfu_aug1.0_2229.1_15737.t1 2 2 Epimerase 2067 2246 1.7e-06 27.6 1.7e-08 2.3e-05 23.9
pfu_aug1.0_2229.1_15737.t1 1 1 NAD_binding_4 2069 2308 0.0 162.4 0.0 0.0 161.7

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_2229.1_15737.t1
Definition-
>pfu_aug1.0_2229.1_15737.t1
atggccgacacccctggagtaatggccgctgtggcgaccttgctgctttggatctccaatctcatccagaggctgattcc
atattctgcaggtacaataccggaacccagtttactcacacatgcgcttttaagactgaagttcgggtctaataaactct
caaaacttgaatatctgacagattattacaacaaagaaggcctttttaagtatgatgcgaaaatatacatcgttgaccca
aaactagctcagactgcaataaataagctagaaaaaggagctgaaaactatctcgaagactcaccattgaaggatacatt
tttaggttcgtcacagaaaagtccggaaacgaggcgagcaattgcggccatcttccgcaagacatcgatagaggaaaaaa
gtaacatgatgataaaagacattgaccttatgtgtgagaaaatgaaagtagaaacgaaaggtcatgtcaatatcacagaa
tggacgctccgacttgcgctggacatcgttggtcatgtgcttttacaacttgattttcgtggtcttgatggccaccaaga
gaaattgttggagtgcatgatgacgatgttacatcgatgttacgctctgagggaaattacgtcagacagcaaggagtttc
aaaatgctaatgatgaatttgacaaaatcaccatccaagttttggaggatgcattgaataaagacgatgacccgcatgaa
ggaaaacgactggtcaagtcactacatgaggcttgtggttttgacgaggcaaaggacaacatgaaactatttttaatggc
aggcactgagacgacagcctccactattcctgtggtattctcattgctgacgcaatatcctgaagttcaggacgagttgc
gagacgaagcagactctctgattggcagattacgatccgatcccacaattccactccctaaaatcgacgccatgatgaag
gaagttctaagactttacccaatagctccgttcataagccgacaaaaccagcatccggtatcacttggtcctatcagtct
agaaaaacacgatcaagatattcaagtatactcatcgtcagaatcatcaaccgcaagtggaaaaaataatgagtatataa
tggcgtcagagaaattggaaaatgttggacatcttgttcatgacttcatgatatctccgcacagtatagtatcaactacg
agaaggcagtgggtaaacgacgaacgaaaatctagattaatagatgctcaattacaaggaatcttcggcttcttcgagag
cgtaaaattaaaaagaacaatcaataacatcatcgatagaatacactggaaccaccagggtcaaaatgaaagaatgttga
gcggaagttctgctgaaggcgtcaatttaccaggaagtgacgtcgatgtgatgtattggatgaagcatcatattgtaatt
caagagaggtctctacttcctcaaacaagactcaacaagccgaatgttcttctaatgtctccgaacaccagtcgtccggg
atatgtgcgaatcgagtgcatctacccaggcacggcaactatagacgtgagattttccctcgtaaacattgatggtaagc
aatacttctcaagttataaattcaaacagtttcatctaacgattgcccatcagaacgccagacaagaatccatcatcgga
ccttgcatacgattacaaacgaatctcggatccgaaatggacaatgcaaattgtcttcgatgtcatttttggcccgatga
tgcatacgaatttttcacacgagagcgaagatatggctggccatctgaacctttgattcagcagatacttagtgatggga
ttcatttggtcccaatcggatcgaaaaatcgaacacgctgtggtacgtgggagaacgactcgcttgaatggcgatactcc
ttttcaatggcagaaattactctagttcattcattcaacgaaattcaatttcgaatgtatggattcctcaagataattat
gaacgacattttcaaaagacatgcaccagaagataccctttgctcatacttcatgaaaacaacgatattttgggtcatag
aggaaacgcatggcgatgtttggcgggaaaacaacattatatatctactggatgcatgcctccaaaaattcatgggattt
gtctattatgaacactgtccaaactttttcatcccgtcccaaaacttattcctcgggaaaatatacggggaaactgcgct
agaaatcaacgaagtactgactcgactgtacgaaaatgggataaatttcatactatacagccattctctttccaaccttc
gagagtattttgaacagattgaaagtaatacctttccatgcgcaattactacatcactgaccgcagatgcaaatgaacgg
gaatgctacttagattttgacttttttgcagcaatacaaattgcactccgactgattgtgccgatgccaccgacaaacct
ccctgacatcaacagaacaacaggcagaagaataacctgcgctgtcattggtgagggcaatatcttgctgaactgcttga
agaaactgaaagaagccaacttcgatataacccatgtgtttacaaatacttctgccgttgaattatattgcgacgaaatc
tcactgctacatagtagacgtaatgcaaatatagaggacattttgaaggagagggagatagactatttcctcagcatatc
taacccaagaattctgcttgaatcagtacttgccataccaagacggtttgctattaattatcatgactctcctcttcctt
catatgctggcgttcaagcaacaagttgggcaattctaaatggagaaaaagaacatggcatcagctggcacgtggttgaa
gctggaattgatacaggtgacattctgcagttccgagctgtttcgatccaaaaagaagactcagccttaagtttaaatct
aaaatgtcaagaggcagcgttgaactcattcaccactcttatcaaagacttacagaaccaaaatgttaagcggaaagttc
aaagcaagctgggacggtcttactacggactatatgctattcctccgaatcttggaattttgagttttgaaaaatctacg
tctgaactttacaaccttgcaagagctcttgagttcggaaatcatgataatgcattaggaagtccgaagatattatcgaa
tacgggtgaattcttcttggtgacaaactcactagaaggatctagtgatacttccattgatagaaatgtccttacgggta
caattttagaagttcttgatgactcagtacgggtcaaaacaggtgatggatcactgtggatatccttagcacaatctgat
ggcggccatctgtcgacttttaatttcaagaaacatggattagcagaaggaaaaagattagcaacacagttcgctgctga
tacttcggaagtggttgatataaggaaaaaagaaaacttctggagaagaaaattagcaaaatatgacccgaccgtatttt
tccgccaacgaatgaatgtcgttgctggtatcatagacgtatcagatgaaccaaacatcgaaacaacagaaatagctctc
ccaaattaccaaaacatttatgatatcgaagcatcttttgtctcattccttggtaggacctgttgcacatcatctgttaa
cgtggggatcttagcaaacaagaaggacgttcccgagaatataaatggtatttatgtcgatgtatgccctactatcatcg
agatagatatgaatgaaacagtaggaaaggtagtcgaaaagtgcaaacagggtctatggaaacacagggaggcaaagaca
tttttggtggatgtcttctaccgatatccggagttaaggggtcgaaaacaaactccacaccataacatcgtaatcggaga
agcatttacttcaaacaacaagagaatgtatgcacaacttcttcttcacgactgtaatattcttttacttttctctgggg
ataaagttcaagtgctgtacaacaaaagaccaggtcaagatttcagacatataatggacgttctgaaacacttcccgact
tttatgacgtccattgaaaaatcgaaaaatacaccactttcgaaagtgaccctgctgtccaattttgagattgaaagatt
gtataaaggacaattcgaacgccaagaaaatgatacacagcttttcgatgaagttgagaagaaagccttatcattcgaca
caaaaactgcactgatgacgtcaatgacatgcttatcgtatgctgaaatgctcgactgcatttatcagttttccaacatt
ctagaagcttcagcagaaaacgggaaaaggagagtgataggccttcatcttccaaactcaatcaggtacgtggtgtcgat
gctgtcaattataaagataggacatgcttttttacctcttcctatggattacccattagaaagaatagcttttaccatgc
atgattcaaatgttacaacagttgttacaactagagatgtggaacagtccctgcaaagcatgtcatctaaaatcaaagta
tcagctttaaacaccacaaagatcttcggtgaggaagtcgtcatgctgagagtcagtcatcaagcagaagtgctgacaga
tgaattagcatgtcctaatattattcttccttccaacacagcttatgtgatgtacacatcaggttctactggaaagccca
aaggagtaagcgttccacagaatgctgttagtaacctagcatatgcacaaatttacttatgggacctgaacgagaacgac
atcattggccagtttgcgtccattggattcgatgcaacgatttcagaaatatttaccgctttgatatcaggtgccacttt
ggcgattttctcagagaaagagcgacttggacatgaattcatttctgcaattaataaaatgcaaatcaacacaattacgc
ttccaccgtctgtcttgaacatctatggacctgacgacatgcctaagctacagaaagtcgtcaccgccggtgaagcatgc
accgtcagcacggcgatgaagtggacgtcagggacgaacatacgattcttcaatgcatatggaccaactgaaacgacagt
atgcgcaacatgttacgaattcaacgtatctccggacaatgaggaggtcaaccaggaactaccaatcggcaaagcgattc
ccggagcttatgtctgcttgcttgatgacttccaacagcctgtccctcccgatgtcattggcgaaatatacattggagga
aaaggattatctaacggatatatcggtcatgcgaaacatttcaacgagaaaaagttcattcaaaatcctttccgctcctc
ggaaatgcttctgtataaaacgggggaccatgcatttcaagacagcgacgggaatattacattcgtcggtagactcgatg
acatggtgaaaatacgtggacagagagttgatcttgccgagatcgaaaacattttaattcaacatccaaaagtagaaata
gcagttgttgtggtaaacaaatgtaaaaagtcgaacgaggtatttatcgctgcttacgttgctcctacatttatttacct
ttcagagctgaaagagtatttggttaaagttcttcctcggtacatgatcccgactttcatttcgaaattagagaaagatc
aatttcctttgactttgagtggaaaaatagaccgcaaggcccttgaaagagatgaatcagttcatgaaagagatccggtt
tcctcggtctcaaaatctcatcttaacgagacccagctagcaatttcgaaactgtggtgcaaagttttaaacatggatga
atcaatggtatatacttttcacaggcaatcatcgttcagtgagcttggtggaaattctctccaattagtccttctacaaa
gagcctttcaagatgatttgggcatcaacctgtctttcacagacattggtacagcggatactatagaagaatttgcggac
gtggtaaaaaggagacaggatgcaaacagaaaacaaggatataaccaacacataaacgatgaggcattgagaaagatgat
tattgaagattccatccttcaggatcacgaagttccacatcatgccagaaggggctcagtgcagtttcagcatttcagat
cattccatcacaagtcggatatgaagtatcctaagaatgtattgatttctggagtcactgggtttctaggagcttatctt
ctaacagaaattttagagcaaactaatgcgcatgtttgctgcatggtacgagagactaccgaggcaagaggattaggcag
aataagggaaaatatgagaagatacaatctatggaaattcgaatattcacaaagaattgccgttgtcatctcagatctat
cacaaccaaaattaggcgtagctcctgacatatataaagagctcactcaagtggtggatgccgtggtcatgaacgctgct
cagatgaacttcaatacaggatatgaagaccatcgtaccgcaaacgtacaaagtacgaaagaatttatatcatttgccat
gacaggtgttcaaaagcgaatattcacaacgtcttctcttggagtattcctttttccaaaagcagatgatccacctcaga
tggtttactatgaggatgactttctcgatgatccactgcagattgcaggtggatacggacgaagcaaatgggcaagtgag
aagctgatcttgcaagcacttgattatctacctggaggagcgatcttcaggccagctagaatatctggttgctcaacaga
tggatatggaccaaaaaacgacctgtttgcttccacaatcctaggaatgaagagactaggatgttatcccgatatggact
ttccatatgatttgacacccgtggattatgtcgcgaaggcaatgattgaaatcgtggtgaagatctgcaacgacaagttc
aaacacgagaaaatttaccatctcttcaatcagcatactatgccttttaataagctgtttgatggaatgggccttcaagg
gtatccacttcaggaatggagacaaaagctattgaaagcacccgaggaaaacaaggagcttattccgttgacacccttct
tcatgtcacctttctgggatagatcccctacctggccaatttttgacacatcaaacacagacagtatgataagtgactcg
acaaaacgcattctaagacctagtagtgaattactgaaagtttataagaactattttgaagcataa

Protein
Protein IDpfu_aug1.0_2229.1_15737.t1
Definition-
>pfu_aug1.0_2229.1_15737.t1
MADTPGVMAAVATLLLWISNLIQRLIPYSAGTIPEPSLLTHALLRLKFGSNKLSKLEYLTDYYNKEGLFKYDAKIYIVDP
KLAQTAINKLEKGAENYLEDSPLKDTFLGSSQKSPETRRAIAAIFRKTSIEEKSNMMIKDIDLMCEKMKVETKGHVNITE
WTLRLALDIVGHVLLQLDFRGLDGHQEKLLECMMTMLHRCYALREITSDSKEFQNANDEFDKITIQVLEDALNKDDDPHE
GKRLVKSLHEACGFDEAKDNMKLFLMAGTETTASTIPVVFSLLTQYPEVQDELRDEADSLIGRLRSDPTIPLPKIDAMMK
EVLRLYPIAPFISRQNQHPVSLGPISLEKHDQDIQVYSSSESSTASGKNNEYIMASEKLENVGHLVHDFMISPHSIVSTT
RRQWVNDERKSRLIDAQLQGIFGFFESVKLKRTINNIIDRIHWNHQGQNERMLSGSSAEGVNLPGSDVDVMYWMKHHIVI
QERSLLPQTRLNKPNVLLMSPNTSRPGYVRIECIYPGTATIDVRFSLVNIDGKQYFSSYKFKQFHLTIAHQNARQESIIG
PCIRLQTNLGSEMDNANCLRCHFWPDDAYEFFTRERRYGWPSEPLIQQILSDGIHLVPIGSKNRTRCGTWENDSLEWRYS
FSMAEITLVHSFNEIQFRMYGFLKIIMNDIFKRHAPEDTLCSYFMKTTIFWVIEETHGDVWRENNIIYLLDACLQKFMGF
VYYEHCPNFFIPSQNLFLGKIYGETALEINEVLTRLYENGINFILYSHSLSNLREYFEQIESNTFPCAITTSLTADANER
ECYLDFDFFAAIQIALRLIVPMPPTNLPDINRTTGRRITCAVIGEGNILLNCLKKLKEANFDITHVFTNTSAVELYCDEI
SLLHSRRNANIEDILKEREIDYFLSISNPRILLESVLAIPRRFAINYHDSPLPSYAGVQATSWAILNGEKEHGISWHVVE
AGIDTGDILQFRAVSIQKEDSALSLNLKCQEAALNSFTTLIKDLQNQNVKRKVQSKLGRSYYGLYAIPPNLGILSFEKST
SELYNLARALEFGNHDNALGSPKILSNTGEFFLVTNSLEGSSDTSIDRNVLTGTILEVLDDSVRVKTGDGSLWISLAQSD
GGHLSTFNFKKHGLAEGKRLATQFAADTSEVVDIRKKENFWRRKLAKYDPTVFFRQRMNVVAGIIDVSDEPNIETTEIAL
PNYQNIYDIEASFVSFLGRTCCTSSVNVGILANKKDVPENINGIYVDVCPTIIEIDMNETVGKVVEKCKQGLWKHREAKT
FLVDVFYRYPELRGRKQTPHHNIVIGEAFTSNNKRMYAQLLLHDCNILLLFSGDKVQVLYNKRPGQDFRHIMDVLKHFPT
FMTSIEKSKNTPLSKVTLLSNFEIERLYKGQFERQENDTQLFDEVEKKALSFDTKTALMTSMTCLSYAEMLDCIYQFSNI
LEASAENGKRRVIGLHLPNSIRYVVSMLSIIKIGHAFLPLPMDYPLERIAFTMHDSNVTTVVTTRDVEQSLQSMSSKIKV
SALNTTKIFGEEVVMLRVSHQAEVLTDELACPNIILPSNTAYVMYTSGSTGKPKGVSVPQNAVSNLAYAQIYLWDLNEND
IIGQFASIGFDATISEIFTALISGATLAIFSEKERLGHEFISAINKMQINTITLPPSVLNIYGPDDMPKLQKVVTAGEAC
TVSTAMKWTSGTNIRFFNAYGPTETTVCATCYEFNVSPDNEEVNQELPIGKAIPGAYVCLLDDFQQPVPPDVIGEIYIGG
KGLSNGYIGHAKHFNEKKFIQNPFRSSEMLLYKTGDHAFQDSDGNITFVGRLDDMVKIRGQRVDLAEIENILIQHPKVEI
AVVVVNKCKKSNEVFIAAYVAPTFIYLSELKEYLVKVLPRYMIPTFISKLEKDQFPLTLSGKIDRKALERDESVHERDPV
SSVSKSHLNETQLAISKLWCKVLNMDESMVYTFHRQSSFSELGGNSLQLVLLQRAFQDDLGINLSFTDIGTADTIEEFAD
VVKRRQDANRKQGYNQHINDEALRKMIIEDSILQDHEVPHHARRGSVQFQHFRSFHHKSDMKYPKNVLISGVTGFLGAYL
LTEILEQTNAHVCCMVRETTEARGLGRIRENMRRYNLWKFEYSQRIAVVISDLSQPKLGVAPDIYKELTQVVDAVVMNAA
QMNFNTGYEDHRTANVQSTKEFISFAMTGVQKRIFTTSSLGVFLFPKADDPPQMVYYEDDFLDDPLQIAGGYGRSKWASE
KLILQALDYLPGGAIFRPARISGCSTDGYGPKNDLFASTILGMKRLGCYPDMDFPYDLTPVDYVAKAMIEIVVKICNDKF
KHEKIYHLFNQHTMPFNKLFDGMGLQGYPLQEWRQKLLKAPEENKELIPLTPFFMSPFWDRSPTWPIFDTSNTDSMISDS
TKRILRPSSELLKVYKNYFEA

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