Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_22345.1_11451
Locus scaffold22345.1 : 18373 ... 27661 : -
To GenomeBrowser scaffold22345.1:18373..27661
Genes list of scaffold scaffold22345.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_22345.1_11451.t1 1 1 Peptidase_M13 82 150 8.4e-16 57.7 1.9e-19 1.4e-15 57.0

Transcript
Transcript IDpfu_aug1.0_22345.1_11451.t1
Definition-
>pfu_aug1.0_22345.1_11451.t1
gcaaagtttatacaggagaagattggatatgaggattatattttagatgataaagaactaaacagactttatgaaaatta
taccactaatagtgtgacctactttgacaatgtgttacacatactgaacagagctaatgtagactcactgaggagactga
gggaagaggtagacaaaaacgaatggtacactgcccctgccacagtaaatgcttactacaacagtgttctcaatagaatc
agacgtcagtacgataaagatggtaacctgaaacaatggtggacgtcagaggtcatagacaagtttaagggacaagctga
atgcatcataaaccagtacggtaacttctctgtgccggaagctgatggcatgaagctcaatggtatcaatactcaaggag
agaatatagcagacaatggtggattgaagcagagttatcgggtaatcaaaggattttaa

Protein
Protein IDpfu_aug1.0_22345.1_11451.t1
Definition-
>pfu_aug1.0_22345.1_11451.t1
AKFIQEKIGYEDYILDDKELNRLYENYTTNSVTYFDNVLHILNRANVDSLRRLREEVDKNEWYTAPATVNAYYNSVLNRI
RRQYDKDGNLKQWWTSEVIDKFKGQAECIINQYGNFSVPEADGMKLNGINTQGENIADNGGLKQSYRVIKGF

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