Gene
| Gene Model ID | pfu_aug1.0_2240.1_22919 |
|---|---|
| Locus | scaffold2240.1 : 72269 ... 85165 : - |
| To GenomeBrowser | scaffold2240.1:72269..85165 |
| Genes list of scaffold | scaffold2240.1 |
| Synonym | pfu_aug2.0_131.1_03676 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2240.1_22919.t1 | 1 | 1 | N-glycanase_C | 52 | 193 | 4.3e-39 | 133.4 | 3.60134e-43 | 5.3e-39 | 133.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2240.1_22919.t1 | gi|260823940|ref|XP_002606926.1| | hypothetical protein BRAFLDRAFT_91695 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2240.1_22919.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2240.1_22919.t1 atggagacttcattctttttgcaatatgatgggatgcaagtactcaaggtcctctaccaaattgatcactttcagccctt tgtccccaactcaggtgacgtatatccagcggaggcctttatattataccaaccaggagctacatttaacagatcctaca actctaacttcaaaccatataacttcactgtacctaaagatgttctaaaggtggagatatacgctgtaataacaggacac ggtagtgatgagaatggctgtggggagttctgtgtcacgtctcaccattttgacattaacggtcacgtctctaatatcac atttagtgaagcagggacaccatttggttgtgcagagcaagttttaaccggagtagagccaaacgagcatggcacttggt tatacggacgtaacggctggtgtgacggtaggaacgtgtttccgtgggtaatagacatcacgagctaccttaatcatcat ggacagacaaatcaaatcagatactttggatggtttaacggaactgatccagatccgaaacagaatccggggcttattgt gatatactcctatatgatttattatagaaaatacgaagttcaacattga |
|
Protein
| Protein ID | pfu_aug1.0_2240.1_22919.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2240.1_22919.t1 METSFFLQYDGMQVLKVLYQIDHFQPFVPNSGDVYPAEAFILYQPGATFNRSYNSNFKPYNFTVPKDVLKVEIYAVITGH GSDENGCGEFCVTSHHFDINGHVSNITFSEAGTPFGCAEQVLTGVEPNEHGTWLYGRNGWCDGRNVFPWVIDITSYLNHH GQTNQIRYFGWFNGTDPDPKQNPGLIVIYSYMIYYRKYEVQH |
|