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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2244.1_08261
Locus scaffold2244.1 : 15804 ... 33655 : -
To GenomeBrowser scaffold2244.1:15804..33655
Genes list of scaffold scaffold2244.1
Synonym pfu_aug2.0_12988.1_29778

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2244.1_08261.t1 gi|291230332|ref|XP_002735122.1| PREDICTED: MIT domain-containing protein 1-like [Saccoglossus kowalevskii] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 5
egg-4cell 1
8-16cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2244.1_08261.t1
Definition-
>pfu_aug1.0_2244.1_08261.t1
atggggtcggggcccgtgcaattgggaaaattaacgacgtttgggaatattttgggaaagggcaaagttcatgagcagat
acaaatagacaatgatgccacaggttacagctatagtgttatcttctccagattcctggatcagttcctgacgtgtatag
aaatagaagatccctatattaggtcaactcatcagatttataatttattacggttctgcgagttagtggtgaaatctgca
gcccctgtcacagaaataaaattaaccaccggcagagatgatagtgccgatggccagaggcagcaacagaataaactacg
taatctgaagactagcctagccaatcataatgtcacgctacatgtggaatataatgatgatctacacgacagagaaatta
gatttaacaacggttggattgtaaagataggacgaggtttggacatgtataaggccatggagaataatttctgtattgga
ttctgtgactttgatctacgtaaatgccataaaacaactgtggatattttccacaaggactacattagttcagctagtga
ttcagtaacgtga

Protein
Protein IDpfu_aug1.0_2244.1_08261.t1
Definition-
>pfu_aug1.0_2244.1_08261.t1
MGSGPVQLGKLTTFGNILGKGKVHEQIQIDNDATGYSYSVIFSRFLDQFLTCIEIEDPYIRSTHQIYNLLRFCELVVKSA
APVTEIKLTTGRDDSADGQRQQQNKLRNLKTSLANHNVTLHVEYNDDLHDREIRFNNGWIVKIGRGLDMYKAMENNFCIG
FCDFDLRKCHKTTVDIFHKDYISSASDSVT

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