Gene
| Gene Model ID | pfu_aug1.0_2262.1_44294 |
|---|---|
| Locus | scaffold2262.1 : 10230 ... 20965 : - |
| To GenomeBrowser | scaffold2262.1:10230..20965 |
| Genes list of scaffold | scaffold2262.1 |
| Synonym | pfu_aug2.0_633.1_11015 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2262.1_44294.t1 | 3 | 1 | OATP | 54 | 221 | 0.0 | 188.8 | 0.0 | 2.8026e-45 | 154.2 |
| pfu_aug1.0_2262.1_44294.t1 | 3 | 2 | OATP | 219 | 257 | 0.0 | 188.8 | 4.5e-15 | 3.4e-11 | 41.9 |
| pfu_aug1.0_2262.1_44294.t1 | 3 | 3 | OATP | 264 | 311 | 0.0 | 188.8 | 0.016 | 120.0 | 0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2262.1_44294.t1 | gi|260827563|ref|XP_002608734.1| | hypothetical protein BRAFLDRAFT_73955 [Branchiostoma floridae] | 7.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_2262.1_44294.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2262.1_44294.t1 atgtcaaaggccatgacaacgcagagcaccgaaatggacacctaccggaaaagttttctttctcaaccacagaagataga tgttgatgatgaagatgacagtcagctaagatgtgcgtacggaccattctcaccaaaatttctacaaaagttcctgaaca tcaaacttttcgtcttcctgctctgcatggtcggctgcatagagggcgctgcggtaaatggaatcgtcaacataattctg acgacccttgagcgccagtttagcttgccgagctctcagtcgggtcttatagtcagttctacagacatcggtgccgttat ttttgtgttgtttgtgagctttataggatccaaaggggttcgaccaaaatggatcggaggaggaactttcatcatggctc tgggatcgttcattttcatcacacctcacatttttcagggagaatacgattaccaaagtataggtggcggtggaggtaac aagacggtatgtgacgtcaataacgtggagacgtgtacaacaaggtcaggttctggtatgttgtacgtgttcatgctggc acaatttgttcacggtatagggttcacacccatgttcacactgggaacagcttacgttgacgacaacgcacctacagaat caacagccctgtatctgggaacaatacccggaccagtcttaaccggatacgtcattgatcagtcgtgtggtctgtggcag gacttttgtggtgagcgtggttcttgttgggtctatgataggactcagatgagctggcgcctctttgtgtggtgggtctg tgtcaaggttttcagtggtgtgctatttttgatctcaagctgcctcgtgaaagaagctgactatgacgacaaggaactgg aaatggaaaaatcaacgaaaaagtctgttgaaaacggtacaacaaagccggatcaagcgggcaccgtgaatgcttcgtat accaatgacgacaatgacaaagttgtggtcaacgggaatgaccctggatatgaaagcatgtcaacaaatctatga |
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Protein
| Protein ID | pfu_aug1.0_2262.1_44294.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2262.1_44294.t1 MSKAMTTQSTEMDTYRKSFLSQPQKIDVDDEDDSQLRCAYGPFSPKFLQKFLNIKLFVFLLCMVGCIEGAAVNGIVNIIL TTLERQFSLPSSQSGLIVSSTDIGAVIFVLFVSFIGSKGVRPKWIGGGTFIMALGSFIFITPHIFQGEYDYQSIGGGGGN KTVCDVNNVETCTTRSGSGMLYVFMLAQFVHGIGFTPMFTLGTAYVDDNAPTESTALYLGTIPGPVLTGYVIDQSCGLWQ DFCGERGSCWVYDRTQMSWRLFVWWVCVKVFSGVLFLISSCLVKEADYDDKELEMEKSTKKSVENGTTKPDQAGTVNASY TNDDNDKVVVNGNDPGYESMSTNL |
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