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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_22655.1_47531
Locus scaffold22655.1 : 10949 ... 16765 : -
To GenomeBrowser scaffold22655.1:10949..16765
Genes list of scaffold scaffold22655.1
Synonym pfu_aug2.0_673.1_11067

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_22655.1_47531.t1 15 1 LRR_8 33 83 0.0 224.3 4.8e-12 9.0e-09 34.9
pfu_aug1.0_22655.1_47531.t1 17 1 LRR_4 34 59 0.0 262.2 1.4e-06 0.0027 17.3
pfu_aug1.0_22655.1_47531.t1 9 1 LRR_9 47 109 3.7e-10 39.6 0.07 130.0 2.0
pfu_aug1.0_22655.1_47531.t1 17 1 LRR_6 48 61 1.1e-21 74.3 0.012 23.0 5.4
pfu_aug1.0_22655.1_47531.t1 17 2 LRR_4 48 88 0.0 262.2 4.7e-13 8.6e-10 38.0
pfu_aug1.0_22655.1_47531.t1 24 1 LRR_1 49 68 0.0 157.3 0.001 1.9 8.8
pfu_aug1.0_22655.1_47531.t1 19 1 LRR_7 49 64 8.3e-32 103.5 0.13 250.0 2.6
pfu_aug1.0_22655.1_47531.t1 17 2 LRR_6 70 84 1.1e-21 74.3 0.00097 1.8 8.8
pfu_aug1.0_22655.1_47531.t1 24 2 LRR_1 72 88 0.0 157.3 0.00012 0.21 11.7
pfu_aug1.0_22655.1_47531.t1 19 2 LRR_7 72 87 8.3e-32 103.5 0.00012 0.23 11.8
pfu_aug1.0_22655.1_47531.t1 15 2 LRR_8 94 132 0.0 224.3 0.0013 2.4 7.9
pfu_aug1.0_22655.1_47531.t1 17 3 LRR_4 95 133 0.0 262.2 5.3e-07 0.00098 18.6
pfu_aug1.0_22655.1_47531.t1 9 2 LRR_9 121 197 3.7e-10 39.6 0.00012 0.23 11.0
pfu_aug1.0_22655.1_47531.t1 15 3 LRR_8 142 196 0.0 224.3 4.0e-12 7.4e-09 35.2
pfu_aug1.0_22655.1_47531.t1 24 3 LRR_1 143 160 0.0 157.3 0.049 91.0 3.7
pfu_aug1.0_22655.1_47531.t1 17 4 LRR_4 144 177 0.0 262.2 7.4e-05 0.14 11.8
pfu_aug1.0_22655.1_47531.t1 17 3 LRR_6 160 174 1.1e-21 74.3 0.3 560.0 1.1
pfu_aug1.0_22655.1_47531.t1 19 3 LRR_7 161 177 8.3e-32 103.5 0.0057 11.0 6.7
pfu_aug1.0_22655.1_47531.t1 9 3 LRR_9 162 218 3.7e-10 39.6 2.2e-05 0.04 13.4
pfu_aug1.0_22655.1_47531.t1 24 4 LRR_1 163 181 0.0 157.3 0.0015 2.8 8.3
pfu_aug1.0_22655.1_47531.t1 17 4 LRR_6 184 198 1.1e-21 74.3 0.00026 0.49 10.6
pfu_aug1.0_22655.1_47531.t1 15 4 LRR_8 185 243 0.0 224.3 6.9e-09 1.3e-05 24.8
pfu_aug1.0_22655.1_47531.t1 19 4 LRR_7 185 200 8.3e-32 103.5 0.00027 0.5 10.7
pfu_aug1.0_22655.1_47531.t1 17 5 LRR_4 185 223 0.0 262.2 1.8e-09 3.3e-06 26.5
pfu_aug1.0_22655.1_47531.t1 24 5 LRR_1 186 205 0.0 157.3 3.4e-05 0.062 13.3
pfu_aug1.0_22655.1_47531.t1 17 5 LRR_6 207 220 1.1e-21 74.3 0.041 76.0 3.8
pfu_aug1.0_22655.1_47531.t1 19 5 LRR_7 208 223 8.3e-32 103.5 0.16 300.0 2.3
pfu_aug1.0_22655.1_47531.t1 24 6 LRR_1 209 228 0.0 157.3 0.0055 10.0 6.6
pfu_aug1.0_22655.1_47531.t1 15 5 LRR_8 233 289 0.0 224.3 1.4e-10 2.5e-07 30.3
pfu_aug1.0_22655.1_47531.t1 24 7 LRR_1 233 252 0.0 157.3 0.031 58.0 4.3
pfu_aug1.0_22655.1_47531.t1 19 6 LRR_7 233 247 8.3e-32 103.5 0.038 70.0 4.3
pfu_aug1.0_22655.1_47531.t1 17 6 LRR_4 233 270 0.0 262.2 1.8e-10 3.4e-07 29.7
pfu_aug1.0_22655.1_47531.t1 9 4 LRR_9 236 305 3.7e-10 39.6 0.00012 0.23 10.9
pfu_aug1.0_22655.1_47531.t1 17 6 LRR_6 253 267 1.1e-21 74.3 0.06 110.0 3.3
pfu_aug1.0_22655.1_47531.t1 15 6 LRR_8 255 311 0.0 224.3 1.1e-11 2.1e-08 33.7
pfu_aug1.0_22655.1_47531.t1 24 8 LRR_1 255 273 0.0 157.3 0.0042 7.7 6.9
pfu_aug1.0_22655.1_47531.t1 19 7 LRR_7 255 270 8.3e-32 103.5 0.00032 0.59 10.5
pfu_aug1.0_22655.1_47531.t1 17 7 LRR_4 256 297 0.0 262.2 1.6e-09 2.9e-06 26.7
pfu_aug1.0_22655.1_47531.t1 17 7 LRR_6 276 291 1.1e-21 74.3 0.00018 0.34 11.1
pfu_aug1.0_22655.1_47531.t1 17 8 LRR_4 277 312 0.0 262.2 8.6e-08 0.00016 21.2
pfu_aug1.0_22655.1_47531.t1 24 9 LRR_1 278 300 0.0 157.3 0.00032 0.59 10.3
pfu_aug1.0_22655.1_47531.t1 19 8 LRR_7 278 291 8.3e-32 103.5 0.0084 15.0 6.2
pfu_aug1.0_22655.1_47531.t1 9 5 LRR_9 278 332 3.7e-10 39.6 0.0038 7.0 6.1
pfu_aug1.0_22655.1_47531.t1 15 7 LRR_8 300 357 0.0 224.3 2.6e-07 0.00048 19.8
pfu_aug1.0_22655.1_47531.t1 17 9 LRR_4 300 335 0.0 262.2 2.2e-08 4.1e-05 23.0
pfu_aug1.0_22655.1_47531.t1 17 8 LRR_6 321 334 1.1e-21 74.3 0.0067 12.0 6.2
pfu_aug1.0_22655.1_47531.t1 24 10 LRR_1 323 342 0.0 157.3 4.9e-05 0.091 12.8
pfu_aug1.0_22655.1_47531.t1 19 9 LRR_7 323 338 8.3e-32 103.5 0.024 45.0 4.8
pfu_aug1.0_22655.1_47531.t1 9 6 LRR_9 325 398 3.7e-10 39.6 7.7e-06 0.014 14.9
pfu_aug1.0_22655.1_47531.t1 15 8 LRR_8 347 403 0.0 224.3 1.3e-08 2.4e-05 24.0
pfu_aug1.0_22655.1_47531.t1 24 11 LRR_1 347 365 0.0 157.3 0.17 310.0 2.1
pfu_aug1.0_22655.1_47531.t1 17 10 LRR_4 351 378 0.0 262.2 0.00056 1.0 9.0
pfu_aug1.0_22655.1_47531.t1 17 9 LRR_6 368 381 1.1e-21 74.3 0.011 20.0 5.6
pfu_aug1.0_22655.1_47531.t1 15 9 LRR_8 370 426 0.0 224.3 2.4e-10 4.5e-07 29.5
pfu_aug1.0_22655.1_47531.t1 24 12 LRR_1 371 390 0.0 157.3 0.0016 3.0 8.2
pfu_aug1.0_22655.1_47531.t1 19 10 LRR_7 371 384 8.3e-32 103.5 0.015 29.0 5.4
pfu_aug1.0_22655.1_47531.t1 17 11 LRR_4 371 407 0.0 262.2 4.5e-11 8.4e-08 31.6
pfu_aug1.0_22655.1_47531.t1 17 10 LRR_6 390 404 1.1e-21 74.3 0.027 49.0 4.4
pfu_aug1.0_22655.1_47531.t1 15 10 LRR_8 392 433 0.0 224.3 8.9e-07 0.0017 18.1
pfu_aug1.0_22655.1_47531.t1 24 13 LRR_1 392 411 0.0 157.3 0.0089 17.0 5.9
pfu_aug1.0_22655.1_47531.t1 19 11 LRR_7 392 407 8.3e-32 103.5 0.011 21.0 5.9
pfu_aug1.0_22655.1_47531.t1 17 11 LRR_6 413 427 1.1e-21 74.3 0.034 63.0 4.1
pfu_aug1.0_22655.1_47531.t1 24 14 LRR_1 416 434 0.0 157.3 0.01 19.0 5.7
pfu_aug1.0_22655.1_47531.t1 19 12 LRR_7 416 428 8.3e-32 103.5 0.12 220.0 2.8
pfu_aug1.0_22655.1_47531.t1 17 12 LRR_4 416 444 0.0 262.2 0.0075 14.0 5.4
pfu_aug1.0_22655.1_47531.t1 17 12 LRR_6 433 445 1.1e-21 74.3 0.022 41.0 4.6
pfu_aug1.0_22655.1_47531.t1 24 15 LRR_1 435 445 0.0 157.3 0.17 320.0 2.0
pfu_aug1.0_22655.1_47531.t1 15 11 LRR_8 470 524 0.0 224.3 3.4e-09 6.3e-06 25.8
pfu_aug1.0_22655.1_47531.t1 17 13 LRR_4 470 505 0.0 262.2 2.7e-05 0.05 13.2
pfu_aug1.0_22655.1_47531.t1 9 7 LRR_9 490 541 3.7e-10 39.6 0.022 41.0 3.6
pfu_aug1.0_22655.1_47531.t1 24 16 LRR_1 491 510 0.0 157.3 0.00079 1.5 9.1
pfu_aug1.0_22655.1_47531.t1 19 13 LRR_7 491 505 8.3e-32 103.5 0.029 54.0 4.6
pfu_aug1.0_22655.1_47531.t1 15 12 LRR_8 513 570 0.0 224.3 1.9e-12 3.6e-09 36.2
pfu_aug1.0_22655.1_47531.t1 24 17 LRR_1 514 533 0.0 157.3 0.0002 0.37 10.9
pfu_aug1.0_22655.1_47531.t1 19 14 LRR_7 514 528 8.3e-32 103.5 0.0017 3.2 8.3
pfu_aug1.0_22655.1_47531.t1 17 13 LRR_6 514 526 1.1e-21 74.3 0.027 51.0 4.3
pfu_aug1.0_22655.1_47531.t1 17 14 LRR_4 514 550 0.0 262.2 7.8e-13 1.5e-09 37.2
pfu_aug1.0_22655.1_47531.t1 9 8 LRR_9 527 607 3.7e-10 39.6 0.00027 0.5 9.9
pfu_aug1.0_22655.1_47531.t1 17 14 LRR_6 534 547 1.1e-21 74.3 0.0022 4.1 7.7
pfu_aug1.0_22655.1_47531.t1 24 18 LRR_1 536 554 0.0 157.3 0.0055 10.0 6.6
pfu_aug1.0_22655.1_47531.t1 19 15 LRR_7 536 548 8.3e-32 103.5 0.0057 11.0 6.7
pfu_aug1.0_22655.1_47531.t1 19 16 LRR_7 558 574 8.3e-32 103.5 0.036 66.0 4.3
pfu_aug1.0_22655.1_47531.t1 17 15 LRR_6 558 570 1.1e-21 74.3 0.0011 2.0 8.7
pfu_aug1.0_22655.1_47531.t1 17 15 LRR_4 559 594 0.0 262.2 5.2e-11 9.7e-08 31.4
pfu_aug1.0_22655.1_47531.t1 15 13 LRR_8 559 617 0.0 224.3 4.6e-08 8.6e-05 22.2
pfu_aug1.0_22655.1_47531.t1 24 19 LRR_1 559 580 0.0 157.3 7.5e-06 0.014 15.3
pfu_aug1.0_22655.1_47531.t1 17 16 LRR_6 580 593 1.1e-21 74.3 0.0047 8.7 6.7
pfu_aug1.0_22655.1_47531.t1 15 14 LRR_8 582 640 0.0 224.3 1.7e-07 0.00031 20.4
pfu_aug1.0_22655.1_47531.t1 24 20 LRR_1 582 599 0.0 157.3 0.0015 2.9 8.2
pfu_aug1.0_22655.1_47531.t1 19 17 LRR_7 582 597 8.3e-32 103.5 0.0069 13.0 6.5
pfu_aug1.0_22655.1_47531.t1 9 9 LRR_9 608 668 3.7e-10 39.6 0.028 52.0 3.3
pfu_aug1.0_22655.1_47531.t1 24 21 LRR_1 609 625 0.0 157.3 0.058 110.0 3.4
pfu_aug1.0_22655.1_47531.t1 17 16 LRR_4 611 640 0.0 262.2 0.63 1200.0 -0.7
pfu_aug1.0_22655.1_47531.t1 15 15 LRR_8 630 686 0.0 224.3 1.3e-10 2.4e-07 30.4
pfu_aug1.0_22655.1_47531.t1 24 22 LRR_1 630 646 0.0 157.3 0.84 1500.0 -0.1
pfu_aug1.0_22655.1_47531.t1 17 17 LRR_4 653 690 0.0 262.2 1.9e-10 3.6e-07 29.6
pfu_aug1.0_22655.1_47531.t1 24 23 LRR_1 653 673 0.0 157.3 0.00052 0.96 9.7
pfu_aug1.0_22655.1_47531.t1 19 18 LRR_7 653 667 8.3e-32 103.5 0.12 230.0 2.7
pfu_aug1.0_22655.1_47531.t1 17 17 LRR_6 673 686 1.1e-21 74.3 0.0039 7.2 7.0
pfu_aug1.0_22655.1_47531.t1 24 24 LRR_1 676 692 0.0 157.3 0.019 36.0 4.9
pfu_aug1.0_22655.1_47531.t1 19 19 LRR_7 676 690 8.3e-32 103.5 0.017 31.0 5.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_22655.1_47531.t1 gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_22655.1_47531.t1
Definition- 
>pfu_aug1.0_22655.1_47531.t1
atgatagttgacttctccacgaatggactgaaacttttacccttggaaatatggaagaatgaggaaatccaaataaaagc
aattaagtttttggcagacagtaatcgattgaaaaaactgccgaaacaaatttcggatttagaaaacctggaatatatcg
acctgcgcaacaatacgctgggtgctgtgccgggaactattttcaagctgaaaagtttaacggagttggactgctccaac
aacaacataaagactctaccagcaaccatcaataaggcgccatcactagaaattgtcacagcagtaaacaacaagataaa
agccttacctaaaacgatcaacaaatgtccgactctggtgatcattgactgttctgataacgtcattagaagtttgaaga
aaacaatctacgaagttggtgcagaaataattctgaaaaacaatcgccttgttgacctacccgatgctacaatcaagaat
ccggctttaaaaaagttggtggtgtccggaaattcaatttcacgaattccagaaaatatcaataatgtgtccactttgac
gtggcttgacctctccgacaacgacttgacggaactcccgaaggaactcggatttctgaaatatcttcattatttgaatg
tttcaatgaacaagattgactacttaccggacgaagtttgctcattgcagttcgccttgacattccttcacgcgtctgat
aatgagatcaaaaacttgccgaccgacattcacaaacttcaacgactgacaactcttgaggttgcaaacaaccaactaga
gtccttaccagataagttctatgagatgaagaacattaaaactctcgatttgtcagggaacaaattacagacagcagcag
gtatcagcaaactgaaatctgtagaacacgtcaaactggcgaataatgctatctccttcctaccggaggatctgccgcac
ctgaagtccttgatttctctggatgtgtcagggaatcacatcaaagtgataccggaaaatctgtgtaaggttggaactct
aaaatcgttcaaggcaaacaacaataaaatcagtgcaatcccagagtccctaggtgacaatcagctaattacggaacttt
gcttatcacataaccgaattcaaggtctgcctcaagacttgaagaaactccgaagtctggaggtactagagattggtcac
aatcaaatagacgctttgcctaaagcatttgatgttcttaagttcctacgacatctgaaaatagcaggaaattctatcac
ggaatttgtcattcccaaaacgttggtttcactggacatctcagacaaccctgtggtgcttccagcggcggatccaaggt
cagttcttgtacaactaggagaaaaagcctgggcaagtcagtttacagagcttcttattgcagacattaagctggacgag
gttcccgtatccatttcgcacatgaaattgctaaagaagttagacttgaagagaaaccttcttaaatccatacctgatga
actatgcagactaaggcttttggaagagctggacctagctgacaatgaactgtctgaacttccagcttctatcaataaca
tgaaaaatctgcgaaaacttgatgtttcacaaaacaagatcgcggagttctgccctggtctatgtttactgcatcagtta
gaacatctgaacatgtcgtataacaacatcatcgatttgcccgagaattttggagaactcaacaaattgatcacattgga
tctatcgaataacgagctgatgggtctacctgaagacaaaatggacgttctggcatccatgctagaaatagacgtttcga
agaatcatatcaatatgatcccaagcgactttccgtatttatatagaatacgctcacttaaagcggcctctaatgacctt
acggtcctccctggtgacatcatcaaaatggcgggacttgaagttcttgacgtcacagataacttgttagagagtttacc
agactccatatgcaagcttcctgttctgaaggacctgaacatttctgacaacaaaataaaagctttcccatcaaaaatgg
aaagtttaaaacaacgatgtcaggttacaacaggaactcagtctgcttacaaacagcgggatgccccggatgggctaaag
tccggggaagttcaaacggacgcagaagggtcaccaaaaagttcgaggaaaaacgattag

Protein
Protein IDpfu_aug1.0_22655.1_47531.t1
Definition- 
>pfu_aug1.0_22655.1_47531.t1
MIVDFSTNGLKLLPLEIWKNEEIQIKAIKFLADSNRLKKLPKQISDLENLEYIDLRNNTLGAVPGTIFKLKSLTELDCSN
NNIKTLPATINKAPSLEIVTAVNNKIKALPKTINKCPTLVIIDCSDNVIRSLKKTIYEVGAEIILKNNRLVDLPDATIKN
PALKKLVVSGNSISRIPENINNVSTLTWLDLSDNDLTELPKELGFLKYLHYLNVSMNKIDYLPDEVCSLQFALTFLHASD
NEIKNLPTDIHKLQRLTTLEVANNQLESLPDKFYEMKNIKTLDLSGNKLQTAAGISKLKSVEHVKLANNAISFLPEDLPH
LKSLISLDVSGNHIKVIPENLCKVGTLKSFKANNNKISAIPESLGDNQLITELCLSHNRIQGLPQDLKKLRSLEVLEIGH
NQIDALPKAFDVLKFLRHLKIAGNSITEFVIPKTLVSLDISDNPVVLPAADPRSVLVQLGEKAWASQFTELLIADIKLDE
VPVSISHMKLLKKLDLKRNLLKSIPDELCRLRLLEELDLADNELSELPASINNMKNLRKLDVSQNKIAEFCPGLCLLHQL
EHLNMSYNNIIDLPENFGELNKLITLDLSNNELMGLPEDKMDVLASMLEIDVSKNHINMIPSDFPYLYRIRSLKAASNDL
TVLPGDIIKMAGLEVLDVTDNLLESLPDSICKLPVLKDLNISDNKIKAFPSKMESLKQRCQVTTGTQSAYKQRDAPDGLK
SGEVQTDAEGSPKSSRKND

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Okinawa Institute of Science and Technology
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