Gene
| Gene Model ID | pfu_aug1.0_22694.1_33281 |
|---|---|
| Locus | scaffold22694.1 : 17 ... 2295 : - |
| To GenomeBrowser | scaffold22694.1:17..2295 |
| Genes list of scaffold | scaffold22694.1 |
| Synonym | pfu_aug2.0_511.1_04273 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-C3HC4_3 | 16 | 67 | 1.4e-08 | 34.2 | 7.7e-12 | 1.4e-08 | 34.2 |
| pfu_aug1.0_22694.1_33281.t1 | 3 | 1 | zf-RING_2 | 16 | 62 | 2.0e-07 | 30.7 | 1.1e-10 | 2.0e-07 | 30.7 |
| pfu_aug1.0_22694.1_33281.t1 | 1 | 1 | zf-C3HC4 | 17 | 61 | 1.2e-08 | 34.4 | 6.3e-12 | 1.2e-08 | 34.4 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-C3HC4_2 | 17 | 61 | 5.5e-08 | 32.7 | 2.9e-11 | 5.5e-08 | 32.7 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-RING_UBOX | 17 | 59 | 2.0e-07 | 30.6 | 1.1e-10 | 2.0e-07 | 30.6 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-RING_5 | 17 | 63 | 6.1e-07 | 29.0 | 3.3e-10 | 6.1e-07 | 29.0 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-C3HC4_4 | 17 | 61 | 4.4e-06 | 26.4 | 2.3e-09 | 4.4e-06 | 26.4 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 1 | zf-B_box | 99 | 145 | 6.3e-06 | 25.9 | 1.9e-07 | 0.00036 | 20.3 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-C3HC4_3 | 100 | 133 | 1.4e-08 | 34.2 | 0.15 | 280.0 | 1.2 |
| pfu_aug1.0_22694.1_33281.t1 | 3 | 2 | zf-RING_2 | 101 | 166 | 2.0e-07 | 30.7 | 0.0038 | 7.1 | 6.5 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-C3HC4_2 | 102 | 134 | 5.5e-08 | 32.7 | 0.078 | 150.0 | 2.5 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-RING_5 | 102 | 166 | 6.1e-07 | 29.0 | 0.04 | 75.0 | 3.1 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-RING_UBOX | 148 | 166 | 2.0e-07 | 30.6 | 0.75 | 1400.0 | -0.9 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-B_box | 163 | 198 | 6.3e-06 | 25.9 | 3.0e-07 | 0.00055 | 19.7 |
| pfu_aug1.0_22694.1_33281.t1 | 3 | 3 | zf-RING_2 | 178 | 196 | 2.0e-07 | 30.7 | 0.23 | 430.0 | 0.8 |
| pfu_aug1.0_22694.1_33281.t1 | 2 | 2 | zf-C3HC4_4 | 184 | 197 | 4.4e-06 | 26.4 | 0.31 | 570.0 | 0.4 |
Transcript
| Transcript ID | pfu_aug1.0_22694.1_33281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22694.1_33281.t1 atggccgaatcaaggattgaaacaggtatgtcggatgatcttattacctgtcctatttgctttgaaagatttaaatcgcc gaaatctttaccttgcctgcatacgtactgtaaagggtgtctccatacatacattgcgaaggctttagcggaaaacaaag cgaaagttgaatgtcccacttgtcgttccgccgttcgtgattttaccggacaggatgttaatcaatggattgagaacttg cccacaaactttattgtgaattctctgattgaactcacagaaattcaaaacggtaatagaaactgcgacatttgttcaca attggggaaaagtgcacatgcgacaaaatggtgtaacgaatgttcagaggtgtattgtgatgcatgctctcaaagtcata atcttcacaaaatgttcaggaagcatacattaatacaaataaaagatgctttgaaaggcatgtattttacagcggtagaa aactcttttgattgtcccgtccataaaaatcgcaaaattgagctatactgctctgatcatgctgaaccttgctgcctgac atgcatgacagttcatcacaggaaatgtgacaaagttactacactcgaagaagcggccgagaattttggggaggatccta cattcgtctcctttacaaaacgtatgaatgagttgacatctgaattaagaaatgagagaactcgtcatgataaagcagag aagaattttgcattacaaatctctcaggtcaaagatcaagctcagaagaagaagcaagaaatgataaaacatatcaaaaa gttgtataccaagtttgaaggggaaatccaagtgatagagaaacaacgtgagacagaggaccattccggaatccttactc aaaagatagtacagctagagctttttgtgaaaacactcgaaacgctacagtcaacatcatctgatttgtcactgtttctg gagttccataaaatgaagggcaaaaagaaagactttgaagaggttttggatcaatataaatcaagcaaaaagcaagaatc agttgaattcatatgtcacgaaaatgtagacaaattcgagtctgttgtttcttcttttggcaaagttcgcgtcgtcgatt ctattgcacaagcacaagcgtcgagatctgcaacaatagactacagttcaagcgctttgaaacaagttgtcaccatagtg gaagaaggggttaaatttagagatgccgtatgtattcgctcaggtacaatacttgcagtagatgagatgaagaattctat ttgggcatatgatgatactggaaagctactagccaactcgaacttaccgtgtacaccttgggctctcgctatcgtcggta caagcagtgtggtcgttacacttcgtgacgataaatctcttcagtatttaacatgcgatactagttcaaaaacattcata aaaggcaaaacgatccaatttaatgaaacaccgtgggcaattgattatgctgacaatcactttttttgttacatttaa |
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Protein
| Protein ID | pfu_aug1.0_22694.1_33281.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22694.1_33281.t1 MAESRIETGMSDDLITCPICFERFKSPKSLPCLHTYCKGCLHTYIAKALAENKAKVECPTCRSAVRDFTGQDVNQWIENL PTNFIVNSLIELTEIQNGNRNCDICSQLGKSAHATKWCNECSEVYCDACSQSHNLHKMFRKHTLIQIKDALKGMYFTAVE NSFDCPVHKNRKIELYCSDHAEPCCLTCMTVHHRKCDKVTTLEEAAENFGEDPTFVSFTKRMNELTSELRNERTRHDKAE KNFALQISQVKDQAQKKKQEMIKHIKKLYTKFEGEIQVIEKQRETEDHSGILTQKIVQLELFVKTLETLQSTSSDLSLFL EFHKMKGKKKDFEEVLDQYKSSKKQESVEFICHENVDKFESVVSSFGKVRVVDSIAQAQASRSATIDYSSSALKQVVTIV EEGVKFRDAVCIRSGTILAVDEMKNSIWAYDDTGKLLANSNLPCTPWALAIVGTSSVVVTLRDDKSLQYLTCDTSSKTFI KGKTIQFNETPWAIDYADNHFFCYI |
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