Gene
| Gene Model ID | pfu_aug1.0_22695.1_33282 |
|---|---|
| Locus | scaffold22695.1 : 1 ... 9454 : - |
| To GenomeBrowser | scaffold22695.1:1..9454 |
| Genes list of scaffold | scaffold22695.1 |
| Synonym | pfu_aug2.0_238.1_27095 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22695.1_33282.t1 | 2 | 1 | RNase_PH | 19 | 154 | 2.0e-25 | 89.6 | 5.0e-29 | 3.7e-25 | 88.7 |
| pfu_aug1.0_22695.1_33282.t1 | 1 | 1 | RNase_PH_C | 181 | 242 | 2.3e-08 | 33.8 | 6.2e-12 | 4.6e-08 | 32.8 |
| pfu_aug1.0_22695.1_33282.t1 | 2 | 2 | RNase_PH | 241 | 259 | 2.0e-25 | 89.6 | 0.99 | 7400.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_22695.1_33282.t1 | gi|326914227|ref|XP_003203428.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_22695.1_33282.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22695.1_33282.t1 ttttatgaaaagtttatccaacaagaagttcgtccagacggaagagaacttggagagttccgcagcactgtgtgtaacct gagctgcattactacggccaatggatcagctctaataaagataggaaatacaaccatcatatgtggtataaaggcagaat tagcttcccctgcttcggaagagccatgtaaaggtttcatcatcccaaacctagagttatctcccatgtgttcatcaaga ttccgctctggaccaccaggggagcaagcacaagttgcaagtcaatttttagcagatgtaatcaaaaattccaaatgcgt agacctggagacactttgtgtggaaagtgggaaattggtgtgggttttacactgtgatctcatttgtctggattatgatg ggaatataacggacgcaagtattctggctttgatagcggcacttcagacaacaaaactacctaaagtgaaacttaacgaa gatacagacaagttcgaaacatttgaatctgacttagtttcattagcactgctgagtcatcccgtctcgacaactttttc tatcctcggtgaccaaatacttatagtcgatcctacatcagaggaagaatctttgtctatgggtaccattaccatcgtag ccttggtagacaaaatctgtatggtgtacaaaccaggtggaaaccccgttgcatcagaacagttacctactttatttgag agagctatagaaagagggaaggaagtcagaagtcttgtggacaaaaccttttccagtgcatcttga |
|
Protein
| Protein ID | pfu_aug1.0_22695.1_33282.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22695.1_33282.t1 FYEKFIQQEVRPDGRELGEFRSTVCNLSCITTANGSALIKIGNTTIICGIKAELASPASEEPCKGFIIPNLELSPMCSSR FRSGPPGEQAQVASQFLADVIKNSKCVDLETLCVESGKLVWVLHCDLICLDYDGNITDASILALIAALQTTKLPKVKLNE DTDKFETFESDLVSLALLSHPVSTTFSILGDQILIVDPTSEEESLSMGTITIVALVDKICMVYKPGGNPVASEQLPTLFE RAIERGKEVRSLVDKTFSSAS |
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