Gene
| Gene Model ID | pfu_aug1.0_227.1_00196 |
|---|---|
| Locus | scaffold227.1 : 25206 ... 31394 : + |
| To GenomeBrowser | scaffold227.1:25206..31394 |
| Genes list of scaffold | scaffold227.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_227.1_00196.t1 | 2 | 1 | zf-C2H2 | 7 | 30 | 5.3e-08 | 32.7 | 7.7e-07 | 0.001 | 19.2 |
| pfu_aug1.0_227.1_00196.t1 | 2 | 2 | zf-C2H2 | 36 | 59 | 5.3e-08 | 32.7 | 9.9e-06 | 0.013 | 15.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_227.1_00196.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_227.1_00196.t1 atgcagaacgctaagatatacaactgttggaaatgtggttctacgttcaaacaacgtacttcactttcccgtcatctgag tgaggttcacgagaggcggtaccgcttcacatgtcctctttgtggtactcacttcaaacgtaaaggtgactgtctccggc atatctccaggcgacacaaaggtgccgacatatcaccggaagatctgactgcgcatgtctcaatcataaaggaggaagaa caggaagactacggaagtatacaagggattcaacttgaccaaaggggtgacgaaggacttccaaaatcgccatgttgtct cttaagtgagagtgaatcgtgtgcatcggacgaatctgtcaacaaatgtcaaaaatccattcaaattagtagtgttacca cggaaacggtgaacgaaacaccgagaaataggataggcgaaacaaagagacttccttcatccgagctaatggtcaaacct caccttccggtctccattaacggaagtgacaacctttgtgtgcgaaagaaagtgaaagtaacacgatatcctgatggaaa aactgtgacggtgacgacttatttccggcattgtaagtctaacgagtctggatacggatcgagttcatcgtcgtgcataa gtgacgacgaaccgtag |
|
Protein
| Protein ID | pfu_aug1.0_227.1_00196.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_227.1_00196.t1 MQNAKIYNCWKCGSTFKQRTSLSRHLSEVHERRYRFTCPLCGTHFKRKGDCLRHISRRHKGADISPEDLTAHVSIIKEEE QEDYGSIQGIQLDQRGDEGLPKSPCCLLSESESCASDESVNKCQKSIQISSVTTETVNETPRNRIGETKRLPSSELMVKP HLPVSINGSDNLCVRKKVKVTRYPDGKTVTVTTYFRHCKSNESGYGSSSSSCISDDEP |
|