Gene
| Gene Model ID | pfu_aug1.0_227.1_00199 |
|---|---|
| Locus | scaffold227.1 : 49074 ... 63675 : - |
| To GenomeBrowser | scaffold227.1:49074..63675 |
| Genes list of scaffold | scaffold227.1 |
| Synonym | pfu_aug2.0_663.1_11060 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_227.1_00199.t1 | 2 | 1 | TPR_16 | 81 | 112 | 1.2e-09 | 38.5 | 0.0016 | 1.6 | 9.4 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 1 | TPR_2 | 81 | 111 | 2.9e-08 | 33.0 | 0.0018 | 1.9 | 8.6 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 1 | TPR_14 | 82 | 121 | 1.8e-07 | 31.1 | 0.011 | 12.0 | 6.8 |
| pfu_aug1.0_227.1_00199.t1 | 2 | 1 | TPR_11 | 82 | 145 | 3.3e-07 | 29.8 | 9.6e-06 | 0.01 | 15.4 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 1 | TPR_1 | 87 | 112 | 8.1e-06 | 25.2 | 0.0095 | 10.0 | 5.9 |
| pfu_aug1.0_227.1_00199.t1 | 2 | 1 | TPR_19 | 94 | 146 | 1.0e-10 | 41.7 | 1.2e-06 | 0.0013 | 19.0 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 2 | TPR_1 | 116 | 146 | 8.1e-06 | 25.2 | 0.0012 | 1.2 | 8.8 |
| pfu_aug1.0_227.1_00199.t1 | 2 | 2 | TPR_16 | 118 | 180 | 1.2e-09 | 38.5 | 4.4e-09 | 4.7e-06 | 27.1 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 2 | TPR_2 | 118 | 146 | 2.9e-08 | 33.0 | 0.00028 | 0.29 | 11.1 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 2 | TPR_14 | 120 | 155 | 1.8e-07 | 31.1 | 0.00097 | 1.0 | 10.1 |
| pfu_aug1.0_227.1_00199.t1 | 2 | 2 | TPR_19 | 124 | 180 | 1.0e-10 | 41.7 | 2.2e-09 | 2.3e-06 | 27.8 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 3 | TPR_2 | 149 | 180 | 2.9e-08 | 33.0 | 0.00075 | 0.79 | 9.7 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 3 | TPR_14 | 150 | 188 | 1.8e-07 | 31.1 | 4.6e-05 | 0.049 | 14.2 |
| pfu_aug1.0_227.1_00199.t1 | 2 | 2 | TPR_11 | 150 | 183 | 3.3e-07 | 29.8 | 0.0001 | 0.11 | 12.1 |
| pfu_aug1.0_227.1_00199.t1 | 3 | 3 | TPR_1 | 158 | 180 | 8.1e-06 | 25.2 | 0.0044 | 4.6 | 7.0 |
Transcript
| Transcript ID | pfu_aug1.0_227.1_00199.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_227.1_00199.t1 atgccatcggccccgctactgaaagtacgaaccaccgggagaagctgtaagcgtcgggcttcgccactgacatcaagtta tggtaacggcgcctcggatatgccgaatggcacgcagagaaacatttctgtttatacgatgccaaagaaaggtaaaggaa atgcttctgtcagtaatggaactgcaacatccactaaatcacacaagaaagaatccaatggagtaattcatgagagcacg gaggtgttgatgaagtcaggtcagatatactctgattccggccgagttgacgaaggtctgacaaatacacaggcagcaat agacagggatccttacttcatcatagccaaacttaacaaagcgaagacattgatgcagatgcagcgtggcgaagaagcag aggaaattctaaaggagcttctcaatattaaccccaaactttgggatatccatgctacatatggggatttcctgatgtca cagaaacgaccaaaagaagctgcagttatgtttagggagggaacaaaattgaaaccagatttacttcctttctggatcca cttacgttatgcacaagaagccagtggagatagggaagggatgatggagacttctaaaaagatacaagaattagaagaca agagcaaagcacaagggagagggtaa |
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Protein
| Protein ID | pfu_aug1.0_227.1_00199.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_227.1_00199.t1 MPSAPLLKVRTTGRSCKRRASPLTSSYGNGASDMPNGTQRNISVYTMPKKGKGNASVSNGTATSTKSHKKESNGVIHEST EVLMKSGQIYSDSGRVDEGLTNTQAAIDRDPYFIIAKLNKAKTLMQMQRGEEAEEILKELLNINPKLWDIHATYGDFLMS QKRPKEAAVMFREGTKLKPDLLPFWIHLRYAQEASGDREGMMETSKKIQELEDKSKAQGRG |
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