Gene
| Gene Model ID | pfu_aug1.0_22711.1_04237 |
|---|---|
| Locus | scaffold22711.1 : 1 ... 14245 : - |
| To GenomeBrowser | scaffold22711.1:1..14245 |
| Genes list of scaffold | scaffold22711.1 |
| Synonym | pfu_aug2.0_2095.1_18684 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22711.1_04237.t1 | 1 | 1 | SAICAR_synt | 15 | 196 | 0.0 | 175.7 | 0.0 | 0.0 | 175.3 |
| pfu_aug1.0_22711.1_04237.t1 | 1 | 1 | AIRC | 213 | 352 | 7.7e-34 | 116.1 | 1.6e-37 | 1.2e-33 | 115.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_22711.1_04237.t1 | gi|260798364|ref|XP_002594170.1| | hypothetical protein BRAFLDRAFT_117612 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_22711.1_04237.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22711.1_04237.t1 atggaaattaaaagtatggaggagttctgttcggtccataaatcattatgtataaagacccattttgttcgtcaggaaag tgacacatccttcgtcggtattaagtgtgcaatgattcccatagagtgggtaacaagacgtatagctactgggtcgttta ttaaacggaacgagggagttaaagaaggatataggttcagtccaccaaaacaggagactttcttcaaggatgatgccaac catgacccacagtggtcctatgaacagtgcgtggccgctaagctggaagtgggtgggatacagattgggccgcatgagct ggacatcatggctcggaccacagtgaccgtgtttgagatacttgagagatgttgggcggcactggactgtagccttatcg atatgaaaatagagtttggtgttaatccagaaactggtgagatcctgttatctgacgtgattgacagcgattcgtggcgt ttgtggccggcaggagaccgtagactgatgaaggacaagcaggtttacagagaactagcagaggtcactccggaggcact ggacactgtcaagagaaactttgagtgggtcgcagagagagtcaagttgctgtctcccaagccccatgctcgggcagtgg tgttcatgggctctgcctctgacatgccacactgcgagaagataagggacagctgcaagctctatggagtgccctgtgag ctccgcgtctcatcagctcataaaggcacggaggaaaccatgaaaatactcgctgaatatgaaggtgagggtataccgac ggtatttatagctgttgcaggtcgtagtaacggactagggccggtactgtcgggcaatgctacatggccggttataaact gtcctccgttgtcaggagactgggggtcacatgacatctggtcctcaatgaggctgccttcagggttgggatgtagtaca gtgatgtatccagaagctgccggtcagtgtgcagcccaaatcctgtcactgagtgaccacatcatctggagtaagatcag ggccaagcaactcaacacctggatagggctgaaaacagccgacagaaagtgccgtaacgacaagtga |
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Protein
| Protein ID | pfu_aug1.0_22711.1_04237.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22711.1_04237.t1 MEIKSMEEFCSVHKSLCIKTHFVRQESDTSFVGIKCAMIPIEWVTRRIATGSFIKRNEGVKEGYRFSPPKQETFFKDDAN HDPQWSYEQCVAAKLEVGGIQIGPHELDIMARTTVTVFEILERCWAALDCSLIDMKIEFGVNPETGEILLSDVIDSDSWR LWPAGDRRLMKDKQVYRELAEVTPEALDTVKRNFEWVAERVKLLSPKPHARAVVFMGSASDMPHCEKIRDSCKLYGVPCE LRVSSAHKGTEETMKILAEYEGEGIPTVFIAVAGRSNGLGPVLSGNATWPVINCPPLSGDWGSHDIWSSMRLPSGLGCST VMYPEAAGQCAAQILSLSDHIIWSKIRAKQLNTWIGLKTADRKCRNDK |
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