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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_22711.1_04238
Locus scaffold22711.1 : 21246 ... 25385 : +
To GenomeBrowser scaffold22711.1:21246..25385
Genes list of scaffold scaffold22711.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_22711.1_04238.t1 1 1 Pribosyltran 5 53 1.1e-09 38.0 2.8e-13 1.4e-09 37.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_22711.1_04238.t1 gi|344288402|ref|XP_003415939.1| PREDICTED: amidophosphoribosyltransferase isoform X1 [Loxodonta africana] 2.0e-15

Transcript
Transcript IDpfu_aug1.0_22711.1_04238.t1
Definition-
>pfu_aug1.0_22711.1_04238.t1
atgagactccgacaacttggcgtggccaagaagtttggaccaatttctgagaatatcaaaggaaagcggatcgtgctgat
tgacgattctatcgtgagaggagtgactatgatacccatcgtaaaattgctccgtgctgagggagcaaaggaggtcagtt
attttttaaataaacttgagaaactacatcaaattaattccttttcttatccaaatgtttcggccatgggccttcatcag
tggaatgttagaaactag

Protein
Protein IDpfu_aug1.0_22711.1_04238.t1
Definition-
>pfu_aug1.0_22711.1_04238.t1
MRLRQLGVAKKFGPISENIKGKRIVLIDDSIVRGVTMIPIVKLLRAEGAKEVSYFLNKLEKLHQINSFSYPNVSAMGLHQ
WNVRN

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