Gene
| Gene Model ID | pfu_aug1.0_2272.1_66253 |
|---|---|
| Locus | scaffold2272.1 : 9581 ... 22085 : - |
| To GenomeBrowser | scaffold2272.1:9581..22085 |
| Genes list of scaffold | scaffold2272.1 |
| Synonym | pfu_aug2.0_1372.1_08342 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2272.1_66253.t1 | 2 | 1 | Ammonium_transp | 77 | 127 | 6.5e-12 | 44.6 | 2.9e-08 | 0.00014 | 20.4 |
| pfu_aug1.0_2272.1_66253.t1 | 2 | 2 | Ammonium_transp | 131 | 173 | 6.5e-12 | 44.6 | 7.1e-09 | 3.5e-05 | 22.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
Transcript
| Transcript ID | pfu_aug1.0_2272.1_66253.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2272.1_66253.t1 atgtccaaacctcttcagagaagacagggccgcgaccacctgtcctctgtgaatgtcaatcggactcctcgagtgacaac atatatgagctcgttacagccggcagagcacggtctgtattacgtgcgccctcttttatatccatttacatattcatctg tgttgcttgggctccttcgttttgcggtcttgtttgtgtgtggtcatctaacagtgaggagaatgttctactccacaatt gtacgttctacgaaactagcatggcaattgataggttggtcgtctatagtcggttggtctgctgtcttatccctcattat atttggactgttgaaactatgtaaggttcttcgtgtgccggcagagatagaggaaaagggttggtcgtctatagtcggtt ggtctgctgttttatccctcattatatttggactgttgaaactttgtaaggtacttcgtgtaccgacagagatagaggaa aagggattggatattcctaagcataaagaaccggcatacccagtagaggcttatggacatggacacattgaaaagttgat tcagattttggaaaatcatccaagggagatcgaatttagctacacaaacatgacatttaacaaagatgaaccaaccaacg cttactttgagacacctgaagttaaacgtcaccgtgataagatgatggagaacggtacagatgtaacgacggtcaagcta caggtgacggacgaaatggacaataaacaaacagaaatgaacagcagaatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_2272.1_66253.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2272.1_66253.t1 MSKPLQRRQGRDHLSSVNVNRTPRVTTYMSSLQPAEHGLYYVRPLLYPFTYSSVLLGLLRFAVLFVCGHLTVRRMFYSTI VRSTKLAWQLIGWSSIVGWSAVLSLIIFGLLKLCKVLRVPAEIEEKGWSSIVGWSAVLSLIIFGLLKLCKVLRVPTEIEE KGLDIPKHKEPAYPVEAYGHGHIEKLIQILENHPREIEFSYTNMTFNKDEPTNAYFETPEVKRHRDKMMENGTDVTTVKL QVTDEMDNKQTEMNSRM |
|