Gene
| Gene Model ID | pfu_aug1.0_2272.1_66256 |
|---|---|
| Locus | scaffold2272.1 : 50939 ... 59825 : - |
| To GenomeBrowser | scaffold2272.1:50939..59825 |
| Genes list of scaffold | scaffold2272.1 |
| Synonym | pfu_aug2.0_358.1_27294 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2272.1_66256.t1 | gi|260821874|ref|XP_002606328.1| | hypothetical protein BRAFLDRAFT_118503 [Branchiostoma floridae] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2272.1_66256.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2272.1_66256.t1 atgtatagctttgacctcgcggtcgaaatttacataaatgacgatgatatgcgccctttgcagcagggtgttgggaaaaa agaaacaaatcaacattctgtgaagtcattgatacaacgattttttgttgacgagcttcccgccatcataaccgtgcccc cttggctatgtggcaacaatactgacgtacaagacagtacatttggagatttggctctgtatggttgggacatacttaga accggatatgaattaagcagtgctttatccagtgaagccagctcagaatgtagtgagaatttgaatcatacgttatccag tgaagtaagctcagaatgtagtgatgaccttcaccttgatatagattctgttattcaggaaagtctgtttgggtctgtca tgaacattatcaacaattgtgatacagcagtagaagaagagtcgtccacctcaatctcacagacaggtcatttacagcag cagtcacgtgacacgtcacccgtcaagtcacatgacacatcacctgacaagtcacatgaccgttcagagaaaactttcca tgacaaatcatcatccaaatcttcactgtctcatgatctgcagttcaacatcagtaaatggaaatcattatcgagtgacg ataagctgtcggttatagatgacctcagcgtggtgatcagtaaggagctaggattacgagaacaattagaggtcatacgt ataatcaatcccactgcacagatattacccacagatagagaatttgttatagagatatgttatgaaaacttaagaatagt gtgtgtgtgtggtnctcttgatgaagacaaagttaggagaattcaggaataccttaacttcaatgctcaaagttgtagtg taccagagttagacaactgcccatcgacacagaaaaaagactgtaaatctcaaaagaagcagcgagcacaagagcaacga aatcgtcaaaaaattgttaaacagaggcagaggaaagagtatcgtcaaatgatgaaagaaaaacgcagcggattgtttgc tcgagaggaagtgctcatggtgtccgaggttatggatcctggagaaggagctgatatagatatattatcttag |
|
Protein
| Protein ID | pfu_aug1.0_2272.1_66256.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2272.1_66256.t1 MYSFDLAVEIYINDDDMRPLQQGVGKKETNQHSVKSLIQRFFVDELPAIITVPPWLCGNNTDVQDSTFGDLALYGWDILR TGYELSSALSSEASSECSENLNHTLSSEVSSECSDDLHLDIDSVIQESLFGSVMNIINNCDTAVEEESSTSISQTGHLQQ QSRDTSPVKSHDTSPDKSHDRSEKTFHDKSSSKSSLSHDLQFNISKWKSLSSDDKLSVIDDLSVVISKELGLREQLEVIR IINPTAQILPTDREFVIEICYENLRIVCVCGXLDEDKVRRIQEYLNFNAQSCSVPELDNCPSTQKKDCKSQKKQRAQEQR NRQKIVKQRQRKEYRQMMKEKRSGLFAREEVLMVSEVMDPGEGADIDILS |
|