Gene
| Gene Model ID | pfu_aug1.0_22766.1_33292 |
|---|---|
| Locus | scaffold22766.1 : 2926 ... 16049 : + |
| To GenomeBrowser | scaffold22766.1:2926..16049 |
| Genes list of scaffold | scaffold22766.1 |
| Synonym | pfu_aug2.0_254.1_13883 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22766.1_33292.t1 | 4 | 1 | Ank_5 | 34 | 61 | 6.9e-17 | 61.0 | 0.0001 | 0.22 | 11.8 |
| pfu_aug1.0_22766.1_33292.t1 | 1 | 1 | Ank_2 | 35 | 133 | 3.4e-19 | 68.9 | 4.1e-22 | 8.7e-19 | 67.6 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 1 | Ank_4 | 36 | 92 | 4.7e-16 | 58.8 | 3.3e-09 | 7.0e-06 | 26.4 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 1 | Ank | 37 | 59 | 4.1e-21 | 73.6 | 8.3e-06 | 0.018 | 14.8 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 1 | Ank_3 | 37 | 54 | 2.5e-14 | 51.9 | 0.0043 | 9.2 | 6.8 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 2 | Ank_4 | 72 | 125 | 4.7e-16 | 58.8 | 8.3e-13 | 1.8e-09 | 37.8 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 2 | Ank_3 | 72 | 100 | 2.5e-14 | 51.9 | 1.3e-08 | 2.7e-05 | 23.9 |
| pfu_aug1.0_22766.1_33292.t1 | 4 | 2 | Ank_5 | 73 | 103 | 6.9e-17 | 61.0 | 5.7e-08 | 0.00012 | 22.1 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 2 | Ank | 74 | 102 | 4.1e-21 | 73.6 | 1.8e-11 | 3.8e-08 | 32.7 |
| pfu_aug1.0_22766.1_33292.t1 | 4 | 3 | Ank_5 | 91 | 135 | 6.9e-17 | 61.0 | 6.5e-11 | 1.4e-07 | 31.5 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 3 | Ank | 107 | 135 | 4.1e-21 | 73.6 | 4.0e-08 | 8.5e-05 | 22.1 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 3 | Ank_3 | 107 | 132 | 2.5e-14 | 51.9 | 1.9e-06 | 0.0041 | 17.2 |
| pfu_aug1.0_22766.1_33292.t1 | 4 | 4 | Ank_5 | 153 | 171 | 6.9e-17 | 61.0 | 0.39 | 820.0 | 0.4 |
| pfu_aug1.0_22766.1_33292.t1 | 3 | 3 | Ank_4 | 154 | 171 | 4.7e-16 | 58.8 | 0.93 | 2000.0 | -0.6 |
| pfu_aug1.0_22766.1_33292.t1 | 1 | 1 | SOCS_box | 260 | 299 | 4.4e-16 | 58.4 | 4.6e-19 | 9.8e-16 | 57.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_22766.1_33292.t1 | gi|260828315|ref|XP_002609109.1| | hypothetical protein BRAFLDRAFT_126136 [Branchiostoma floridae] | 6.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_22766.1_33292.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22766.1_33292.t1 atggagtccgaagaaagactgccagtttctctgatcaaaaaacataaaaatacctgtcagataaaagagttggggctcga gaagactctcgagaaggagcttgtagatgctgcaaagcgaggagatttttccgtggtaaaggaactattagaattcggaa tatgcccagatgcaaaggaatacaacaagtgcttgttctatgagtcaaagaactacacaactcccttacaaatagcagca acaaatgggtcgtcagacattgtcaactttctcattgaatacggagcttctgttaatgcaagtgatagatttgatgtgag tgccttgcacatggcagcagagaatggaaatctgagctgtttgtcccaactgttggaggcagaagcaaactgtaacgtag gaaccaaatactccaaacacggatcatacacaggtaataattacatgtcatactcagcacacggtgccaagtacacgatc caaaatagacagggagataatgttctccagtatgagctgagaacaaacactagagacatgacaattctgtatgcaatcac taaaagtgtagctaccttgccgtcagtggaatctcttggcattgcacctccgtctaattctgaattgttactgtcccaag cacagaacttcctggcacaaggccgtagttttcagaatgctcaggaccgcaatgctttccagagaagcttgttcaaattt atcaaaagtgacgtgcagtatcacaaaatgatgtggtacaaagaacttattaaaggacctagatctttacagcattattg ccgatgtgttgtcagagatgctctcggggtccagagacttggtaagattaatacactgcctctacccacaacactgaagg aatacttacagctgcagttagaggaagatccttgtgtgtttcctgagtcatcggaggagcagccgtag |
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Protein
| Protein ID | pfu_aug1.0_22766.1_33292.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22766.1_33292.t1 MESEERLPVSLIKKHKNTCQIKELGLEKTLEKELVDAAKRGDFSVVKELLEFGICPDAKEYNKCLFYESKNYTTPLQIAA TNGSSDIVNFLIEYGASVNASDRFDVSALHMAAENGNLSCLSQLLEAEANCNVGTKYSKHGSYTGNNYMSYSAHGAKYTI QNRQGDNVLQYELRTNTRDMTILYAITKSVATLPSVESLGIAPPSNSELLLSQAQNFLAQGRSFQNAQDRNAFQRSLFKF IKSDVQYHKMMWYKELIKGPRSLQHYCRCVVRDALGVQRLGKINTLPLPTTLKEYLQLQLEEDPCVFPESSEEQP |
|