Gene
| Gene Model ID | pfu_aug1.0_22861.1_26051 |
|---|---|
| Locus | scaffold22861.1 : 876 ... 6484 : + |
| To GenomeBrowser | scaffold22861.1:876..6484 |
| Genes list of scaffold | scaffold22861.1 |
| Synonym | pfu_aug2.0_3.1_10044 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22861.1_26051.t1 | 1 | 1 | Proteasome | 14 | 153 | 1.7e-21 | 76.3 | 1.4e-25 | 2.1e-21 | 76.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_22861.1_26051.t1 | gi|126697448|gb|ABO26681.1| | proteasome subunit N3 [Haliotis discus discus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_22861.1_26051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22861.1_26051.t1 atggggacatctgattactcactcagacaaccaacagtgactgggacatcagtacttggtttgaagtttgatggaggtat catcattgctgcagacatgctgggttcgtatggttctctggcgcgataccgtaacttatccaggttgatgaaggtgaacg ataatactgtcataggaatgggtggtgattatgctgacttccagttcttacagtccattatagaacaaagagtcattgaa gaggagtgcttgaatgatggatttagttacacaccaaagagtctgtcctcctggatgaccagggttatgtacaacaggag atctaacttcaatccgctgtggaacacatatctagtgggaggtctacaagacggagaaccttacctcagctacatagata aaatagggatagcatttgaagcaccgactgttgcatgtggatttggcagttacatagctttggtatgtactgatataaat gttagttttaaccagtgttgtgctgattatcactga |
|
Protein
| Protein ID | pfu_aug1.0_22861.1_26051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22861.1_26051.t1 MGTSDYSLRQPTVTGTSVLGLKFDGGIIIAADMLGSYGSLARYRNLSRLMKVNDNTVIGMGGDYADFQFLQSIIEQRVIE EECLNDGFSYTPKSLSSWMTRVMYNRRSNFNPLWNTYLVGGLQDGEPYLSYIDKIGIAFEAPTVACGFGSYIALVCTDIN VSFNQCCADYH |
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