Gene
| Gene Model ID | pfu_aug1.0_22880.1_62183 |
|---|---|
| Locus | scaffold22880.1 : 1 ... 1075 : - |
| To GenomeBrowser | scaffold22880.1:1..1075 |
| Genes list of scaffold | scaffold22880.1 |
| Synonym | pfu_aug2.0_397.1_23978 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_22880.1_62183.t1 | 1 | 1 | Glutaredoxin | 43 | 87 | 3.4e-09 | 36.5 | 3.2e-13 | 4.8e-09 | 36.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_22880.1_62183.t1 | gi|126697396|gb|ABO26655.1| | glutaredoxin 5 [Haliotis discus discus] | 3.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_22880.1_62183.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22880.1_62183.t1 atgtccgtccttcgacgtgcgtttcttttgaaggataaaacaacattttgtcgactatttgtcgcgagatctgtcagtga cacgggctcaaaggaacatatagacagtctggttaaaggcaaaaaggttgtcgtgtttatgaagggcacccccgacgctc caaggtgtggtttcagtaacgctgtcgtccagatcctcaattttcatggagtgaacaattatgaatcccatgatgttctt caagatgaagcactgagacaaggtaaattaagctttaagttctatcgttttgacggatcgggtatgactccgtcggtaag gtga |
|
Protein
| Protein ID | pfu_aug1.0_22880.1_62183.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_22880.1_62183.t1 MSVLRRAFLLKDKTTFCRLFVARSVSDTGSKEHIDSLVKGKKVVVFMKGTPDAPRCGFSNAVVQILNFHGVNNYESHDVL QDEALRQGKLSFKFYRFDGSGMTPSVR |
|