Gene
| Gene Model ID | pfu_aug1.0_2293.1_66266 |
|---|---|
| Locus | scaffold2293.1 : 66436 ... 74652 : + |
| To GenomeBrowser | scaffold2293.1:66436..74652 |
| Genes list of scaffold | scaffold2293.1 |
| Synonym | pfu_aug2.0_266.1_20517 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2293.1_66266.t1 | 1 | 1 | AIG1 | 23 | 227 | 3.8e-33 | 114.3 | 6.9e-37 | 5.1e-33 | 113.9 |
| pfu_aug1.0_2293.1_66266.t1 | 1 | 1 | MMR_HSR1 | 24 | 149 | 1.9e-08 | 34.2 | 4.8e-12 | 3.6e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2293.1_66266.t1 | gi|169146806|emb|CAQ14975.1| | 7.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2293.1_66266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2293.1_66266.t1 atgcagtcaataaacccagggcctcactatgttgcggggaataccagagttgtcgtagatactgagaggcggataatact gattggtaaaataggtgctggaaagagccaatcagggaacgccattcttggttataaatacaatgaagttttcaaagcaa aaaaggcgctaaaatcggtgacgtcagaagtaatgtatggtacatcagtgatgaatgggaaaaggtaccgtgtgtatgat accccaggggcgctgaacccagacgacaaagaactgttttcagagcagctattaaagtgtatatactgtacttcaccagg atttcattgtttgactgtggttatttcagtggcagagagaccgaataaagaagaccttcagttgtataaaaatctgaaga agtatttaggagaccgttttcaggagcacgctgttatcatatttactaaagttgaggacaaggccgagcttgacgacatc ttggctccggcggattgtccggaaattaacgagttgattcgaagctgtggtcggagatatatttgctttggggaggatag gaagggagtgaaacaagaatttgttgatcaatatcatgaaatgctcgaagaacttataaaagacaatgttaggcataaaa tggacttttataaacatcctttgtatgataaagcacaggacttcatagcgaaagatgcaaaagaaattaggaaaaatgac agtgccatctcagaaagtcaagcattagagctggcaagggagagagctatcaatggagaatcagattgcaatgctgatat gaaaaaggaaatcaagaggtggtgtccttgttcaattctttga |
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Protein
| Protein ID | pfu_aug1.0_2293.1_66266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2293.1_66266.t1 MQSINPGPHYVAGNTRVVVDTERRIILIGKIGAGKSQSGNAILGYKYNEVFKAKKALKSVTSEVMYGTSVMNGKRYRVYD TPGALNPDDKELFSEQLLKCIYCTSPGFHCLTVVISVAERPNKEDLQLYKNLKKYLGDRFQEHAVIIFTKVEDKAELDDI LAPADCPEINELIRSCGRRYICFGEDRKGVKQEFVDQYHEMLEELIKDNVRHKMDFYKHPLYDKAQDFIAKDAKEIRKND SAISESQALELARERAINGESDCNADMKKEIKRWCPCSIL |
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