Gene
| Gene Model ID | pfu_aug1.0_2293.1_66268 |
|---|---|
| Locus | scaffold2293.1 : 82046 ... 107064 : + |
| To GenomeBrowser | scaffold2293.1:82046..107064 |
| Genes list of scaffold | scaffold2293.1 |
| Synonym | pfu_aug2.0_266.1_20515 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2293.1_66268.t1 | 1 | 1 | RWD | 256 | 426 | 2.4e-12 | 46.7 | 2.8e-15 | 6.0e-12 | 45.4 |
| pfu_aug1.0_2293.1_66268.t1 | 1 | 1 | zf-CCCH | 317 | 337 | 3.3e-07 | 29.8 | 3.2e-10 | 6.9e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2293.1_66268.t1 | gi|270005433|gb|EFA01881.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2293.1_66268.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2293.1_66268.t1 atgtcagatatgaatgtgatgtcagatttcaatgtgataccagtagtcaatatgatgttagatatccatgggattcaatg tgatattcgatatcaatgtaacatcagatatcaatgtgatgtcagtagtcaatgtgatgtcagatatcaatgtgatgtca gatatcgatgtgatgtcagtagtcaatgtgatgtcagatatcaatgtgatgtcagatatcaatgtaatgtcagatatcga ttgtcagtactcaatgtgatgtcagatatcaatgtaatgtcagatatccatgtgatgtcagtagtcaatgtgatgtcaga tatcaatgtaatgtcagatatcgatgtgatgtcagtagtcaatctgatgtcagatatcaatgtgatgtcagatatcaatg tggtgtcagatatcaatgttatgtcagatatcgatgtgatgtcagtagtcaatgtaatgttagatatcaatgtaatgtca gaaatcgatgtgatgtcagtagccattgtgatgacagatatcaatgtaatgtcagataatgatgtgatatacggctttga gaagcagaggtgcattgaggcgttacagttatgtgacgaggacatagggagtgcctttgagtacctgtttactaaatgct ttgacttaccatgtgatattaatgaatctgatcctactgattacactgatgaagattttaacaatgatggtaagcagaca aaagaggaaatacttctgtcgaatggcttatcctgggaggaggtattagacatgcgtaatgatgagatgctggcattaca gtcaatctacgatacagctttcattgagaaaatatcaaatagggtgtggatgctcagactggagcttacagcattgtgtg atttggtcatgactaaacagactgggaatcctaaagaagaggtatatacagaggacaaatctgaaagtgaattatgtcaa ttctacctaaagggtgcatgcaggtttggtgataagtgtaaatacaaacatgaagtgcccacaaacttgcaatctcttga aataaataaagatgatatggtattcaacgacaatgcaaattttgaattagaattgagatttgcaaaagacaatgtatacc ccctccagcccccgtttattggtttctcctcattggttcctggattccctcctcacatatgtttgaacataacagacaga cttttctctgaggccaaggagctggcagagagtcaacagccagcttttttctcattggtcagtattcttgaggatgagaa tatattggttgatttgatatccaaacctgcctcagagtacagtctaccagataacccggcaccatggaatcgaggacagt cattcggcacatgtaatgaaaataatggaatggttcagcactcaagaatgcgagaatctggattaacggtcattgatgat ggtgactatggggctgattcactcacctcaagggagcaagatttattattgaaaatgctagagaaggatggaaaggacat caagaatgacaatgaaaatgatgaagtcagaggagtgcagagaagtctatcgagagattctgaccacagcggaggtactg ccacaaaagctgaaactcttaagcagaatcgcaggctgaaagaagaatatcttaataagcaaaagccaagacgaatatcc gcaatggccgtggcagaaagagtcgcagaggaaagggccgagaagcttgggaggagtgttggttatcagatcaggctaga gaaagtacagtccccaatgacacgtttactgttctgtactactggtattgtactgcgtcgtttggagggagatgctcgtt tagagggagttacacacgtcattattgatgaggtacacgagagatctgaggaaagtgattttctaatgatgtatttgaga gatatgttaccaaagcgacgagatctgaaagtgatacttatgagtgctacattgaatgctgatctgttctctgcatactt caatggatgtccagttattgatataccaggtaaaacttttcctgtggagcaatatttcttagaagatgcaatagaattta ccaggtttgtgattgaagaaaagtcaccctacgctcgtcctctaaagaaatctaatgccttctaccacaatgtgaatcaa gattatgatgagtatgagaccaatatggaccccagtaaaccacctggtgaaaaagtcaaagatgagaatctctctgtcaa acagctttattatagatactcagagtataagaaatctacatgtaaggctatgagtataatggaccttgacaagataaact ttgaccttgtcctagatttactggtgtggatagtggaaggagatcacaagttcccagcaggtgccattttggttttcctt ccgggatttgcagaaatacaacaattatatgagactttgatcactcatcatttgtttggaaacaggaataaagcaagatt taaagtgataccactccattcaacactctccagtgaggatcaacatgcagtcttcttgtatgattccactaaggggatgg agagtttggacactgtgtgggtgtcccaggctaacgctttacagcgtcgaggacgtgccggtagagtgacctccggcatc tgtttccatctcttcaccagtcatcgttataactacagactacaggaacagcccattccaggagttaactcctcttggat accatctaggatctttgccagtagatgtcaggccaatgttaactccacaaactggaagttagtgtcggctatacttgttg gtgctttgtatcctaacgtggttcaagtaatgaaaccggagaataagtttagtcatgctagtacaggtgctgttccaaag gctctaaaaccagatgaactgaaattcagaacaaaatctgacggctatgtatgtgttattgaattgtatgaaagtacaaa atcagaaattatattccaaagggaatag |
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Protein
| Protein ID | pfu_aug1.0_2293.1_66268.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2293.1_66268.t1 MSDMNVMSDFNVIPVVNMMLDIHGIQCDIRYQCNIRYQCDVSSQCDVRYQCDVRYRCDVSSQCDVRYQCDVRYQCNVRYR LSVLNVMSDINVMSDIHVMSVVNVMSDINVMSDIDVMSVVNLMSDINVMSDINVVSDINVMSDIDVMSVVNVMLDINVMS EIDVMSVAIVMTDINVMSDNDVIYGFEKQRCIEALQLCDEDIGSAFEYLFTKCFDLPCDINESDPTDYTDEDFNNDGKQT KEEILLSNGLSWEEVLDMRNDEMLALQSIYDTAFIEKISNRVWMLRLELTALCDLVMTKQTGNPKEEVYTEDKSESELCQ FYLKGACRFGDKCKYKHEVPTNLQSLEINKDDMVFNDNANFELELRFAKDNVYPLQPPFIGFSSLVPGFPPHICLNITDR LFSEAKELAESQQPAFFSLVSILEDENILVDLISKPASEYSLPDNPAPWNRGQSFGTCNENNGMVQHSRMRESGLTVIDD GDYGADSLTSREQDLLLKMLEKDGKDIKNDNENDEVRGVQRSLSRDSDHSGGTATKAETLKQNRRLKEEYLNKQKPRRIS AMAVAERVAEERAEKLGRSVGYQIRLEKVQSPMTRLLFCTTGIVLRRLEGDARLEGVTHVIIDEVHERSEESDFLMMYLR DMLPKRRDLKVILMSATLNADLFSAYFNGCPVIDIPGKTFPVEQYFLEDAIEFTRFVIEEKSPYARPLKKSNAFYHNVNQ DYDEYETNMDPSKPPGEKVKDENLSVKQLYYRYSEYKKSTCKAMSIMDLDKINFDLVLDLLVWIVEGDHKFPAGAILVFL PGFAEIQQLYETLITHHLFGNRNKARFKVIPLHSTLSSEDQHAVFLYDSTKGMESLDTVWVSQANALQRRGRAGRVTSGI CFHLFTSHRYNYRLQEQPIPGVNSSWIPSRIFASRCQANVNSTNWKLVSAILVGALYPNVVQVMKPENKFSHASTGAVPK ALKPDELKFRTKSDGYVCVIELYESTKSEIIFQRE |
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