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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2295.1_01045
Locus scaffold2295.1 : 94475 ... 105605 : -
To GenomeBrowser scaffold2295.1:94475..105605
Genes list of scaffold scaffold2295.1
Synonym pfu_aug2.0_1964.1_15331

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2295.1_01045.t1 gi|291229665|ref|XP_002734793.1| PREDICTED: protein cramped-like [Saccoglossus kowalevskii] 9.0e-14

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2295.1_01045.t1
Definition-
>pfu_aug1.0_2295.1_01045.t1
atgtttattgacactaatcagagaggtagtgatagggtaaaactaatgtctagtcccagtggatcaaaaaatcctccaca
aaatttagaaattgaagagagacatgtttcttctgagagattatccgatagtagccaggacatggaagtgctggagactc
gtagaaccattgctattttagaaaacggaattacagaggagaaatcggatgcttgtaatctgactcttgctgagctgtat
ctgatgtttggcagggatgaaaaattacgtcttgagtacgactgggtgcaggataaaacagcattgttggtgacaaactt
aagcaatgtgcttaggaggctttgtaacctggctaatattgagttcactgatatttccacaaagggtggtagcattgcgt
tttctccatgtcgtgcatgtggaagtctgaaggccagaggaaaggggtccagtaaaggtcagaggtcaggaggtcgcagt
cctttgttatccaagtctggagggtctgaccgcatggtggatgcaggaactcaaactgcaaaaactgaaagtactagtca
ggagagggacccagtttttagagtgcctgtgtgtagtcctgctttcttacagaccaaaacaccccataccatggcaagca
ggcagatcattaatcataataatctgttcccaacccagtcaaagggaatcagaaaaatccgtaacaacatgagaaaacca
ctgcagaggaacattttaccgaagtctgtagatcctcagatgttaacaataatgaggccgatacccacacatgctcctca
catgacaacagtcccgattaatctacagaatggccccatgcccccacccatcaacttacagcctggtattcacactacag
gtatcccagggggaactttagtacagctgaatgtacaaccaggatcccctccctccacgtctcagagtcctcttactcca
tccagatcaactaagtcagcagctttacatgtgtcacaagatacaccatctaccagcacagtaactcagttgctgaatcc
tatttctgttgaagtcccacaacatggggtagaaaacccattgtccatagagaactataccccagcacccactcctacat
catctactgtatccccacctaacataagctctatcctggatatctccctgtcaaatctccccctggctactggtgttata
gctgaatcatcagaccgtttgattgacttagctttaggcagtagtaatacattttcagcattactgaaccccaaggatga
gaccccaggcttgggaacagacagtttactgaatacacctacagctaaacctgtaactagtgatggtcatgacacgaccc
atcagtggcttaatggagaggagaatccagagcttagttttatgaacctgttatctgattcacctgtaaaacatgtgaca
tctacgttaatgagagagattcctgcgactatcccaattaacacacaacaagtaacaccgcttttctccgagagctccag
ggattccatcatgggaagactggatgtggattactccatacagagtatgatgaatgagagcagtatagactatgctgcta
agtttatggacctggccgcgcacataacaggaaactccgaaaacagtctcagcaataacatgaagaaaaccgattctaac
ggataa

Protein
Protein IDpfu_aug1.0_2295.1_01045.t1
Definition-
>pfu_aug1.0_2295.1_01045.t1
MFIDTNQRGSDRVKLMSSPSGSKNPPQNLEIEERHVSSERLSDSSQDMEVLETRRTIAILENGITEEKSDACNLTLAELY
LMFGRDEKLRLEYDWVQDKTALLVTNLSNVLRRLCNLANIEFTDISTKGGSIAFSPCRACGSLKARGKGSSKGQRSGGRS
PLLSKSGGSDRMVDAGTQTAKTESTSQERDPVFRVPVCSPAFLQTKTPHTMASRQIINHNNLFPTQSKGIRKIRNNMRKP
LQRNILPKSVDPQMLTIMRPIPTHAPHMTTVPINLQNGPMPPPINLQPGIHTTGIPGGTLVQLNVQPGSPPSTSQSPLTP
SRSTKSAALHVSQDTPSTSTVTQLLNPISVEVPQHGVENPLSIENYTPAPTPTSSTVSPPNISSILDISLSNLPLATGVI
AESSDRLIDLALGSSNTFSALLNPKDETPGLGTDSLLNTPTAKPVTSDGHDTTHQWLNGEENPELSFMNLLSDSPVKHVT
STLMREIPATIPINTQQVTPLFSESSRDSIMGRLDVDYSIQSMMNESSIDYAAKFMDLAAHITGNSENSLSNNMKKTDSN
G

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