Gene
| Gene Model ID | pfu_aug1.0_2295.1_01048 |
|---|---|
| Locus | scaffold2295.1 : 136338 ... 146425 : - |
| To GenomeBrowser | scaffold2295.1:136338..146425 |
| Genes list of scaffold | scaffold2295.1 |
| Synonym | pfu_aug2.0_10.1_00031 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2295.1_01048.t1 | 2 | 1 | SMN | 93 | 118 | 5.4e-10 | 38.8 | 0.78 | 5800.0 | -3.9 |
| pfu_aug1.0_2295.1_01048.t1 | 1 | 1 | TUDOR | 430 | 487 | 2.6e-09 | 36.9 | 6.9e-13 | 5.1e-09 | 36.0 |
| pfu_aug1.0_2295.1_01048.t1 | 2 | 2 | SMN | 431 | 500 | 5.4e-10 | 38.8 | 7.3e-14 | 5.4e-10 | 38.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2295.1_01048.t1 | gi|291233318|ref|XP_002736597.1| | 4.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_2295.1_01048.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2295.1_01048.t1 atggccccgaatattgctgaagttgtgcgtctttggcgaattttgccgaagtcgtgcgtcttctgccaacttcgtggtgg gcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaactctgtttgact tcttagaaactaagatcaaaccctcttcagaagattctggaaaatcatcacagaagcaaaagccattacaggattctagt gaatattctagtcaaaataactacagaaggaatgactataacagagagtatgacgataagccgtaccggacacaaaataa tcctactagatcctcaaaaagtgatagcggtagaacaaatagagagaatgatagaaacagtagaccatactcaaatacag agggacaagggtcttggaagaaggactctgatcaaagacagaggaattataataacaatagtgatgtgtcatctggtgat cgagatagaaacagaaatagtgcaaatactcaacgaggtcagaaatctagtaactatgacaggagcagttcttacaatga tcgtagtgacaattttgatgcagaagttagaaaacagtcacagtatgacaacagaggtaaaggtcaaaggtcaaattaca accagcatgaccaacgttcacagtctgcgagagacggttataggggcaatgaaaattataagagtaatgatagctacagg agaaatgatagttttaggaataatgattctgataggactaagaacttcaatagaaatgatcagttttcaaaccaggatag aaattatcagcagcagtcacggccgaagtcctcccaagactcacgacagagcaactataatgacagagggtatggttcgc aggcgaaaaacaggggaaataattctgaacagggtgactcgaattcattcaatagaaacaataatagtgccaatagtagg tttaatccaagagcacaggattttgttcctgctggacagatgggcctccaaggatttgatccatgtacagggggaggagg aaaaaaccagccacctcccaccaaccagcagcagtattcgtatggtaatcagtaccaacagccaaactttgtcaacttca atgtgccaaaacagttagatatgtacatacgatgttgcaaaaataaaacgccgcaagccagtcacctcactcgtgttcgc gaaattaagacgccgcgaataaaagacgatttacagtatctttatggatttaatgtacgtatatatgtctatatttatca ggaggccccaatgtggaagagaggagacaaatgtatggctaaatactgggaggataataagttttatgaggcgttagtag agggagttgtaccagacctgcccacatgtgttgttaggtttgtggactacggaaatgtagaggaagtcaaccttagtgat gttaaacctctacaaagaaacacgacatccaaagggaagcacaatgatagatcgtacagtaactatgacaaccaaactct acctcagcagccctatgcagctccggttgccatggatacgcagtctgctaagcagcagataaggtccatggaatttcatc ggaaaagatcggatcagccacctcgagacggacgtcctcaacggaactcacaacagctatatcaacccccaggtcaaaga ccgcagtag |
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Protein
| Protein ID | pfu_aug1.0_2295.1_01048.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2295.1_01048.t1 MAPNIAEVVRLWRILPKSCVFCQLRGGRGRRNDENEDVEAPATKPSGPATLFDFLETKIKPSSEDSGKSSQKQKPLQDSS EYSSQNNYRRNDYNREYDDKPYRTQNNPTRSSKSDSGRTNRENDRNSRPYSNTEGQGSWKKDSDQRQRNYNNNSDVSSGD RDRNRNSANTQRGQKSSNYDRSSSYNDRSDNFDAEVRKQSQYDNRGKGQRSNYNQHDQRSQSARDGYRGNENYKSNDSYR RNDSFRNNDSDRTKNFNRNDQFSNQDRNYQQQSRPKSSQDSRQSNYNDRGYGSQAKNRGNNSEQGDSNSFNRNNNSANSR FNPRAQDFVPAGQMGLQGFDPCTGGGGKNQPPPTNQQQYSYGNQYQQPNFVNFNVPKQLDMYIRCCKNKTPQASHLTRVR EIKTPRIKDDLQYLYGFNVRIYVYIYQEAPMWKRGDKCMAKYWEDNKFYEALVEGVVPDLPTCVVRFVDYGNVEEVNLSD VKPLQRNTTSKGKHNDRSYSNYDNQTLPQQPYAAPVAMDTQSAKQQIRSMEFHRKRSDQPPRDGRPQRNSQQLYQPPGQR PQ |
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