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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2295.1_01049
Locus scaffold2295.1 : 157596 ... 162958 : +
To GenomeBrowser scaffold2295.1:157596..162958
Genes list of scaffold scaffold2295.1
Synonym pfu_aug2.0_10.1_00030

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2295.1_01049.t1 1 1 Drf_GBD 1 158 1.2e-35 122.5 2.3e-39 1.7e-35 122.0
pfu_aug1.0_2295.1_01049.t1 1 1 Drf_FH3 162 276 1.4e-26 93.1 4.3e-30 3.2e-26 91.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2295.1_01049.t1 gi|307176412|gb|EFN65986.1| Protein diaphanous [Camponotus floridanus] 0.0

Transcript
Transcript IDpfu_aug1.0_2295.1_01049.t1
Definition-
>pfu_aug1.0_2295.1_01049.t1
atgaatctgacagaggacaagaaggctccgctgagaaatagggacttaaacatgaaaagggctatgttgtccatgcatat
cagtgctgggaaggcaaagcaaagttctttagatacacccagaaattttgtagaagcgctcaaaaatccggacttgaagg
gagagaaacgattaaggacacttgaatcgttaagggtctctctaaccagtaaccctgtcagttgggtgtcagagtttggt
gtcgatggacttaatgcaatactcagaaatcttacatactgctgtgatgcgaaaacagaaaggaaaagtacatatgaatg
cgtcagatgtttaaaagcttttatgaataacaagtttggtctgatggcgattataaaccatgaggaagccctgaccatac
tatcccgtacagttgatccttcagaccccaccaccatgttagaggctgtacggttactggccgctatatgtttggtacct
cctgatggtcacgagaaagcattggagggaataacagtctgtggagagatccgtggacgtgacagatttgtacctattat
tatgggacttggtatgcgggacaaccagcccatgcaggtggcttgtatacagctggtcaatgctatcgttagtactcctg
atgacctggattttaggctccatctccggaacgagataatgagaacaggacttattgatctgattggaagtctgaataac
caacaagatgaagaattgaagacccaccttcagatttttaacgatcaccaagatgaagattttgaagaattctcacatcg
ttacgataacacaaggatagagtttgagtatccttttcatgacattacaaaattcaaattactgtga

Protein
Protein IDpfu_aug1.0_2295.1_01049.t1
Definition-
>pfu_aug1.0_2295.1_01049.t1
MNLTEDKKAPLRNRDLNMKRAMLSMHISAGKAKQSSLDTPRNFVEALKNPDLKGEKRLRTLESLRVSLTSNPVSWVSEFG
VDGLNAILRNLTYCCDAKTERKSTYECVRCLKAFMNNKFGLMAIINHEEALTILSRTVDPSDPTTMLEAVRLLAAICLVP
PDGHEKALEGITVCGEIRGRDRFVPIIMGLGMRDNQPMQVACIQLVNAIVSTPDDLDFRLHLRNEIMRTGLIDLIGSLNN
QQDEELKTHLQIFNDHQDEDFEEFSHRYDNTRIEFEYPFHDITKFKLL

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