Gene
Gene Model ID | pfu_aug1.0_2298.1_58856 |
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Locus | scaffold2298.1 : 28446 ... 52062 : + |
To GenomeBrowser | scaffold2298.1:28446..52062 |
Genes list of scaffold | scaffold2298.1 |
Synonym | pfu_aug2.0_243.1_10487 |
Manual annotation
Study field | Biomineralization |
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Gene name | MAPK |
Description | BLAST best hit to MAP kinase [Aplysia californica] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2298.1_58856.t1 | 2 | 1 | Pkinase | 23 | 86 | 8.8e-15 | 54.5 | 3.5e-13 | 2.6e-09 | 36.6 |
pfu_aug1.0_2298.1_58856.t1 | 2 | 2 | Pkinase | 103 | 134 | 8.8e-15 | 54.5 | 4.3e-07 | 0.0032 | 16.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2298.1_58856.t1 | gi|260159566|gb|ACX32460.1| | mitogen-activated protein kinase [Scylla paramamosain] | 1.0e-39 |
Transcript
Transcript ID | pfu_aug1.0_2298.1_58856.t1 |
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Definition | - |
>pfu_aug1.0_2298.1_58856.t1 atggcgagcagtgatcctgggaaaaaagaagtggtgagcggccaagatttcatggttggtccacgttatactaatcttca atacataggagagggcgcatatggcatggttgtatctgctttggacaatgtcacaggaaacaaagtagctattaagaaaa tctctccatttgaacatcagacatactgccaaagaacactcagagaaatcaagatcctcacacgattcaagcatgaaaat gccagaggttatattcagtccctaccttacaaacccaaagttccatgggccaggctatttgttaaagcagatcccaaggc attggatcttttggacaaaatgttaacgtttaatcctcataaacgagtacgggtagaacagctgttggcgcacccttact tggagcaatattatgaaccccaggatgagcctgtagcagaggagccctttaccttcgagacagagttagatgacttgccc aaagaacgacttaaggaacttatatttgaggaaactcgagagctcaaacagaaacagacataa |
Protein
Protein ID | pfu_aug1.0_2298.1_58856.t1 |
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Definition | - |
>pfu_aug1.0_2298.1_58856.t1 MASSDPGKKEVVSGQDFMVGPRYTNLQYIGEGAYGMVVSALDNVTGNKVAIKKISPFEHQTYCQRTLREIKILTRFKHEN ARGYIQSLPYKPKVPWARLFVKADPKALDLLDKMLTFNPHKRVRVEQLLAHPYLEQYYEPQDEPVAEEPFTFETELDDLP KERLKELIFEETRELKQKQT |