Gene
| Gene Model ID | pfu_aug1.0_2298.1_58856 |
|---|---|
| Locus | scaffold2298.1 : 28446 ... 52062 : + |
| To GenomeBrowser | scaffold2298.1:28446..52062 |
| Genes list of scaffold | scaffold2298.1 |
| Synonym | pfu_aug2.0_243.1_10487 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | MAPK |
| Description | BLAST best hit to MAP kinase [Aplysia californica] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2298.1_58856.t1 | 2 | 1 | Pkinase | 23 | 86 | 8.8e-15 | 54.5 | 3.5e-13 | 2.6e-09 | 36.6 |
| pfu_aug1.0_2298.1_58856.t1 | 2 | 2 | Pkinase | 103 | 134 | 8.8e-15 | 54.5 | 4.3e-07 | 0.0032 | 16.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2298.1_58856.t1 | gi|260159566|gb|ACX32460.1| | mitogen-activated protein kinase [Scylla paramamosain] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_2298.1_58856.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2298.1_58856.t1 atggcgagcagtgatcctgggaaaaaagaagtggtgagcggccaagatttcatggttggtccacgttatactaatcttca atacataggagagggcgcatatggcatggttgtatctgctttggacaatgtcacaggaaacaaagtagctattaagaaaa tctctccatttgaacatcagacatactgccaaagaacactcagagaaatcaagatcctcacacgattcaagcatgaaaat gccagaggttatattcagtccctaccttacaaacccaaagttccatgggccaggctatttgttaaagcagatcccaaggc attggatcttttggacaaaatgttaacgtttaatcctcataaacgagtacgggtagaacagctgttggcgcacccttact tggagcaatattatgaaccccaggatgagcctgtagcagaggagccctttaccttcgagacagagttagatgacttgccc aaagaacgacttaaggaacttatatttgaggaaactcgagagctcaaacagaaacagacataa |
|
Protein
| Protein ID | pfu_aug1.0_2298.1_58856.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2298.1_58856.t1 MASSDPGKKEVVSGQDFMVGPRYTNLQYIGEGAYGMVVSALDNVTGNKVAIKKISPFEHQTYCQRTLREIKILTRFKHEN ARGYIQSLPYKPKVPWARLFVKADPKALDLLDKMLTFNPHKRVRVEQLLAHPYLEQYYEPQDEPVAEEPFTFETELDDLP KERLKELIFEETRELKQKQT |
|