Gene
| Gene Model ID | pfu_aug1.0_2301.1_44331 |
|---|---|
| Locus | scaffold2301.1 : 38018 ... 50176 : - |
| To GenomeBrowser | scaffold2301.1:38018..50176 |
| Genes list of scaffold | scaffold2301.1 |
| Synonym | pfu_aug2.0_170.1_00355 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2301.1_44331.t1 | 1 | 1 | Fibrinogen_C | 729 | 943 | 0.0 | 235.2 | 0.0 | 0.0 | 234.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2301.1_44331.t1 | gi|260799840|ref|XP_002594892.1| | hypothetical protein BRAFLDRAFT_86061 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2301.1_44331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2301.1_44331.t1 atattttaaaagagagtgagaaagaggacaacagtgatgtggtatcgaaagacaagtcagattctatcaaagaagacgat gaggatgcaagagaaattaaactagacaaaataaaagacgaagtagatactgaaaatagaaattcaaagaagaaaatagt ggaatatttagataataacttatcaactgacaatgagttaaaacccgacactacgaaggaaacagctggcgagaaaaatt cctttattgatctggaaaacttggaaatgataatagcatcgaaaacacgtgaatacgaaacgaagatgcaatcattggag cttgtcattatgaaattggaaaaccaagttttgatcgagaaattaaataaacagaatcatacttctacaatgtcaaggct agagacccaaattttgagactcgaaaatgagttactgaaaatgaaccaaagttatcatgatctgagatatgacaacgagg tcctaaagaaacgacaacgaaagtacctggaacttggtcactcctcgatgaattctactcagcaagatggagagcaccat gctgtgataacggaacaacaagcaaagatatcacatctgtcccaactattgcataaccagtcgaccgccatcaatgagat gaaatctaggtcagactatttagaggaccagaacagaatgctctatcaaatggtgatgaaccaaacggctcttatgtccc agatcatgatgcgtgtgcaagagttgagtgaacaaaacatcagacagagagaagaggcacagaaactaaaagaacacctg aaatctgaagtaaaaacaatcatagaagaaagacaggatcaaaagttgaaagaactttccacaagaatgctacgagatat tgacaatattgtatcagacaagaaactagaccggagctctgatagtagttcttcaccaagtgaaaatggaaagttcactg aagtttccattgataggaaaatgtttacctacgagttccaaaggaaatggtgctttggagacagtatttgcgtttataat acaataataaattcatggtgtataccgtactcttcagtcttttggactgaatgcggggcaatatattttaggaatagaag cgtggagaatgagtttggaccttttgcaaaggacgcagtgaccggcgagattcacaaagaagaagcgacagagacacatc caagagatttaccagatgttatcacagtatccgacaaaaataatgatggaaacgatcttaatcaatatttggatcatcct gattcgaaggatgaacaaggcaaaagcgacaaacagctgaaaatggaaacagacacaacagcactagaacaatccttatc cgccgacaagttagccgaggaaggcaatgatcaaaacaaagaaaaggcaacagtaccacagcatatggaagtggttgacc attccaaagacaaggtgcaggaacaattgaaaacttcgtcaggaaatcttgatgatcatatgaaagaaacaacttcagat gaaaattcgtcaattcgaccgcttgtaccagaaaatgataacaactttgcgcctgaaacagaaaaccaaagaccgagtca agatggcgacatagctggacgtcagtcgtctgaggatgattttaaaacgaaacagcaggagaatgttcaaacaatggacc agaaatccgataacaaggaacatactggtattacgtcaggcgaccaaagtggaagcaaacaacagtctgatgataaacca ggaaaccaacaaatggaagcatttcaagatataaaccaacagaacgcccttgaggtagacagaaggcagaatgaagaaaa tcaaacaggctcagaacagctcttggtcccaacaacacaacggcagctaactgaaggaaaacaagaggtttctgatgata agaaagccgatgtttctgacgagaaacagaaagacggagattccaaagacaaaccaaacgagagtgaaacaacaatgaaa gcagacgataagaagcagtcaggagaaactggacaaaaaccaactaaagcagtgaaacaagaggcagaaggcaataaaac ggatcaacagaacaagaaagcaacaaaaactaaaagcactaagaaggggacacaagcagtgaagagaataccaccaaagt atgcgggtacatcaacccagactgatcccaaagattgctacgacctgtatctgcaaggcaggaagcggaaccaagtgtac agaatcaaaccctacggtctcaataaaatgatagaggtattctgtgatatgaagaatggtggatggaccatcatccagaa gcgacaggacggaacaacaaatttctatagagagtggtcagaatacaagaaaggattcggaggtgtgtatggagagcatt ggattggtaacgatcatttgcacagattgaccaatcaggatgagtatacgctgcgtgttgacctcatggactggaagagg cagacaaggcatgctctgtacgattatttcctagtggaggacgagacagaaggatatcgtctgcacatagacggatatag cggagatgctggtgatgccatgaataaacataatggccacaagttctcgacaaaggacgtggataacgataaagtagtca aggaactcggtggttcatgtgccaagaggttcagcggagccgggtggtattacaagtgttatcaaaacaatctcaatgga aagtattacaggaatggcgatattccagaaaaactttatgatggaattacatggaagccttggacaggtcctaattactc actgaaacaagctgaaatgaaaataagaccacgttctgcaatcagtaacacacagtcatga |
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Protein
| Protein ID | pfu_aug1.0_2301.1_44331.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2301.1_44331.t1 ILKESEKEDNSDVVSKDKSDSIKEDDEDAREIKLDKIKDEVDTENRNSKKKIVEYLDNNLSTDNELKPDTTKETAGEKNS FIDLENLEMIIASKTREYETKMQSLELVIMKLENQVLIEKLNKQNHTSTMSRLETQILRLENELLKMNQSYHDLRYDNEV LKKRQRKYLELGHSSMNSTQQDGEHHAVITEQQAKISHLSQLLHNQSTAINEMKSRSDYLEDQNRMLYQMVMNQTALMSQ IMMRVQELSEQNIRQREEAQKLKEHLKSEVKTIIEERQDQKLKELSTRMLRDIDNIVSDKKLDRSSDSSSSPSENGKFTE VSIDRKMFTYEFQRKWCFGDSICVYNTIINSWCIPYSSVFWTECGAIYFRNRSVENEFGPFAKDAVTGEIHKEEATETHP RDLPDVITVSDKNNDGNDLNQYLDHPDSKDEQGKSDKQLKMETDTTALEQSLSADKLAEEGNDQNKEKATVPQHMEVVDH SKDKVQEQLKTSSGNLDDHMKETTSDENSSIRPLVPENDNNFAPETENQRPSQDGDIAGRQSSEDDFKTKQQENVQTMDQ KSDNKEHTGITSGDQSGSKQQSDDKPGNQQMEAFQDINQQNALEVDRRQNEENQTGSEQLLVPTTQRQLTEGKQEVSDDK KADVSDEKQKDGDSKDKPNESETTMKADDKKQSGETGQKPTKAVKQEAEGNKTDQQNKKATKTKSTKKGTQAVKRIPPKY AGTSTQTDPKDCYDLYLQGRKRNQVYRIKPYGLNKMIEVFCDMKNGGWTIIQKRQDGTTNFYREWSEYKKGFGGVYGEHW IGNDHLHRLTNQDEYTLRVDLMDWKRQTRHALYDYFLVEDETEGYRLHIDGYSGDAGDAMNKHNGHKFSTKDVDNDKVVK ELGGSCAKRFSGAGWYYKCYQNNLNGKYYRNGDIPEKLYDGITWKPWTGPNYSLKQAEMKIRPRSAISNTQS |
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