Gene
| Gene Model ID | pfu_aug1.0_2305.1_08284 |
|---|---|
| Locus | scaffold2305.1 : 31373 ... 40955 : - |
| To GenomeBrowser | scaffold2305.1:31373..40955 |
| Genes list of scaffold | scaffold2305.1 |
| Synonym | pfu_aug2.0_385.1_17367 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2305.1_08284.t1 | 1 | 1 | Chitin_bind_3 | 40 | 162 | 3.0e-10 | 40.6 | 1.1e-13 | 5.6e-10 | 39.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2305.1_08284.t1 | gi|321453840|gb|EFX65039.1| | hypothetical protein DAPPUDRAFT_65736 [Daphnia pulex] | 2.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2305.1_08284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2305.1_08284.t1 atgcaagagaacggcatcacaaatggaaatttacaaaacaaatgtggtgtatgtggcgatcctttcaacggaccccgacc gaacgagggaccgaacggaatctacgctataaaaagaccgacctatatctactacgagggtcaggagatcaacgttacgg tccacgtgacagcccgggcgaatggcggattcttccagtttaagctttgtaagtccgattccactacagcggcttctcaa gcttgttttgacgccaaccctctaaaactcgcatctacagcggaccaaacactaattcaaattccggatacagatggcga ggttgtcataccgttacaacttccggcaggaattaactgtgaatattgcgtcatgcaatggacttgggtaacagctcgtg actggcgttgtgagaatcgtaatggacagtttgtttgtggtatgggttacggtgatcagccgacatatgtgaactgcgct gacttccggatcttgtcacaaggagcgcccttccctagcgacttccaatttccggattacaactcggagtacgccagtat atttgggggacacgggggatcaggaacgacccaggcaggtaccacagctactaccactcaagtccaggtggtgaccacgc ctgccgccaccaccccggttcctatcattaccgacccccaaaccaccacacccacaacacaggggagcggcgtcaccacc accgctaacataccctccacgtcacagatcatcattataacccccacccccgggcagactacagcacaggggactacgga acaacccgaggccaccacgaccattccgggactcaccactgagaagttggtcccggccgttataggtggcggcggtggtg ccgtggcagcccctctgtttggctttggtcctctgagtcttggattaggaggtttgggtctgttgttcggattaggaggt gccgatgcactgggaggagtgtcgtatgctccaatgcctctacttccttccgtttccgctttgccgcaagcagtcggatt ttctgttccgcagccgtttatggctccccttacattccatgctgttgaggaatatcccgtacgacttccgcctccagcac ccaagagaggatttggtagaagtcggaacaaaggatatcgtccgtcgtacaataaaattcaaaccgggcgaggatacgga aagtcaaacgtacatgttaattacaataaaggtccatcgtataatttcaaacctcagcctaatcagcaatttttcgaact tccgaggaattacgaaactgctccagagttagggtatgcgagggaacccgacatagaagtcacaaaagaaaggaatgtaa agaaaaacgacacccaagcnacaatcggcatatctgcccgactgcccggcgtctga |
|
Protein
| Protein ID | pfu_aug1.0_2305.1_08284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2305.1_08284.t1 MQENGITNGNLQNKCGVCGDPFNGPRPNEGPNGIYAIKRPTYIYYEGQEINVTVHVTARANGGFFQFKLCKSDSTTAASQ ACFDANPLKLASTADQTLIQIPDTDGEVVIPLQLPAGINCEYCVMQWTWVTARDWRCENRNGQFVCGMGYGDQPTYVNCA DFRILSQGAPFPSDFQFPDYNSEYASIFGGHGGSGTTQAGTTATTTQVQVVTTPAATTPVPIITDPQTTTPTTQGSGVTT TANIPSTSQIIIITPTPGQTTAQGTTEQPEATTTIPGLTTEKLVPAVIGGGGGAVAAPLFGFGPLSLGLGGLGLLFGLGG ADALGGVSYAPMPLLPSVSALPQAVGFSVPQPFMAPLTFHAVEEYPVRLPPPAPKRGFGRSRNKGYRPSYNKIQTGRGYG KSNVHVNYNKGPSYNFKPQPNQQFFELPRNYETAPELGYAREPDIEVTKERNVKKNDTQXTIGISARLPGV |
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