Gene
| Gene Model ID | pfu_aug1.0_23064.1_26060 |
|---|---|
| Locus | scaffold23064.1 : 42 ... 1388 : + |
| To GenomeBrowser | scaffold23064.1:42..1388 |
| Genes list of scaffold | scaffold23064.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | sex peptide receptor-like |
| Description | putative neuropeptide receptor [Daphnia pulex] 4e-13C terminal of the gene model presented significant similarity with C terminal of the known gene models. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23064.1_26060.t1 | 1 | 1 | 7TM_GPCR_Srw | 20 | 157 | 1.8e-10 | 40.4 | 7.8e-14 | 2.3e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23064.1_26060.t1 | gi|321471608|gb|EFX82580.1| | putative neuropeptide receptor, partial [Daphnia pulex] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_23064.1_26060.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23064.1_26060.t1 atggaatcctgtcatgctttcgtcactgagcgtttctccccttatacctacatcgctgtctacagctgggcacgggcagc aatcgtccatattctaccttgtatcggcatgatagtcttcagcggacgcatgctgtatatcatcaaaaaagccagcaaga acagacagacatttcaacgtcaaggacagacatccggacaaaacgatgcacgagaaaaccgcttgacgacttggcttgtc atttttgtagttgctagcgtgattgtagtggaaatgccaagcgccgtttatttcatcattttcgctgcagacacggtcat tcccgatatacagttgaaatcgtctaattacaatgagccaattacagtttcgctcaatgttcttgtaagcttatcttacc cacttctgttcatcatgtactgttgcatgagcaaaaattttcggaaatcattgaaaggtgtatgttgtcgcgcttgtcat tactctgatagagatgactcgggatttgatggtcagaacagcacgagcagaggagggtcgtcaagggtaaccactatatc agacggaggaagaggtaaaccgaccacgaaaactatggggtatggaggaggaagtcccctttctgatgacggcatgtatc ttaacaacatgagcgggaagtccagagacatagatccttctcaaaatggaggcaaaagacgctcgacaaagatatccatc ttatcacaagaaaagagtagagttcatgacacgaagacgtcaccagggaagggaagcataagatcggacgacatcgaaaa taaatctataacgagaaagaagaacgaggaaggcgatttcagttcagaacataaaatctgcgacgaaacagatttccata gtccttgtggtaccataggagaggaagctgtcctcaatccatttaatggaacagcggcacgtttagaggaagggattcct cagcatgagaactacccaaaacgtttagaggactaa |
|
Protein
| Protein ID | pfu_aug1.0_23064.1_26060.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23064.1_26060.t1 MESCHAFVTERFSPYTYIAVYSWARAAIVHILPCIGMIVFSGRMLYIIKKASKNRQTFQRQGQTSGQNDARENRLTTWLV IFVVASVIVVEMPSAVYFIIFAADTVIPDIQLKSSNYNEPITVSLNVLVSLSYPLLFIMYCCMSKNFRKSLKGVCCRACH YSDRDDSGFDGQNSTSRGGSSRVTTISDGGRGKPTTKTMGYGGGSPLSDDGMYLNNMSGKSRDIDPSQNGGKRRSTKISI LSQEKSRVHDTKTSPGKGSIRSDDIENKSITRKKNEEGDFSSEHKICDETDFHSPCGTIGEEAVLNPFNGTAARLEEGIP QHENYPKRLED |
|