Gene
| Gene Model ID | pfu_aug1.0_2307.1_22945 |
|---|---|
| Locus | scaffold2307.1 : 103806 ... 109616 : + |
| To GenomeBrowser | scaffold2307.1:103806..109616 |
| Genes list of scaffold | scaffold2307.1 |
| Synonym | pfu_aug2.0_267.1_23768 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2307.1_22945.t1 | 1 | 1 | Calpain_III | 35 | 182 | 1.90002e-41 | 141.1 | 1.4013e-45 | 2.29995e-41 | 140.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2307.1_22945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2307.1_22945.t1 atgccagcacaggacttgctttctaactttgaggaaattcagtttatccacttaacaccggatgcacttacatcagaact ggctaacaacgagaggaaacagcagtggacggtgacggtttaccatgatgcttggatacgaggtcttacggcgggtgggt gtgggaacgctccttaccaagatttatattggaaaaaccctcaattctcgataacattgacggatccagatgaaaatgac aacagggggcagtgcactattatagttagtcttatggagaaggaaaagaacaacaaatcagagatagctataggttttga tatttacaagcttaaaaacccacaaaatcgacccttagacgttgaatcagctccaaggaatgcccttattttgaaaaaaa gaggaggaatatatcagtataaccgagaggtaaccaaaaggttcgagctgccacctggaagctacgtcatcataccaagt tcattcaaaccacacgaggaggcagaatttatgctaagaatgttcacagaaaaagctgccacaagcagtgtactggacga aacctctgggccatcatcgcctgtgataagacctacagaccccattaaagatttattcgccaagcatgcaggagaattag gaaaactacatgcaagggaattgaagcggtttctccatgacttatctgcactcggcaagttacagatcatctaa |
|
Protein
| Protein ID | pfu_aug1.0_2307.1_22945.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2307.1_22945.t1 MPAQDLLSNFEEIQFIHLTPDALTSELANNERKQQWTVTVYHDAWIRGLTAGGCGNAPYQDLYWKNPQFSITLTDPDEND NRGQCTIIVSLMEKEKNNKSEIAIGFDIYKLKNPQNRPLDVESAPRNALILKKRGGIYQYNREVTKRFELPPGSYVIIPS SFKPHEEAEFMLRMFTEKAATSSVLDETSGPSSPVIRPTDPIKDLFAKHAGELGKLHARELKRFLHDLSALGKLQII |
|