Gene
| Gene Model ID | pfu_aug1.0_2309.1_15775 |
|---|---|
| Locus | scaffold2309.1 : 8428 ... 19185 : - |
| To GenomeBrowser | scaffold2309.1:8428..19185 |
| Genes list of scaffold | scaffold2309.1 |
| Synonym | pfu_aug2.0_281.1_03920 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2309.1_15775.t1 | 2 | 1 | OATP | 125 | 302 | 0.0 | 188.8 | 1.9e-20 | 5.7e-17 | 60.9 |
| pfu_aug1.0_2309.1_15775.t1 | 2 | 2 | OATP | 314 | 598 | 0.0 | 188.8 | 3.60001e-40 | 1.1e-36 | 126.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2309.1_15775.t1 | gi|148225420|ref|NP_001089875.1| | solute carrier organic anion transporter family, member 2B1 [Xenopus laevis] | 4.00001e-41 |
Transcript
| Transcript ID | pfu_aug1.0_2309.1_15775.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2309.1_15775.t1 atgtataacggcacgaataaacggcaaaatgtggaactgcaaaattctttaaagttttcggtcagattcataagcttttc catcttttattaccgcaaacgttcagttttcttcatttttcaaaacatgaaatcaatcaaaacgcgatttttcccaggat tattcatcgttgtcaaggatttttcagtctccaaccaaaagagttcgacacaaggaaaaaaaccaataacgatgggtacg aatgtggaaagtaatggagttcaatacaaaaagaaacaggagtttgacaagcttgacggcgacgatgacccagacacaga atgtggggtcggaagcttccgcccgagttttctccaatgtttcgcgaatgttaatgcctttgtgggtacctacagcttta tagggatgatctcacagactctgtctgtttatgtaaattctcaggtacccgccttggagaaacaattcggtttgaacagt gcagaaagtggtctggtgatgagcttcaatgatatagggttcttcaccacaattttgtttgctgcttccattgtccgttt tgtacatatccctcgttttatttatctttgtatgatcctatatgggttttcgggaatcatttgcagtatccctcatttta ttgcccaaggacaaggtttacttgataacttttacatagaaagcagtatagtggttgattccaataatactatgcctaag gaatcaaagccagacttactttgtgatgctacaagaattctcaagaacatctctgacctgggaaattgtgccactgactc agaatcgaaacttgcacagctgatatcccccagcatttccatcaagaaaacagcgttaggtctaataggcattggcatgg tcctccaaggtataggaaaggcgccacgtggagcggctttcactgtacggttaaaacagtctgagaaagacaaagcaaaa ggaaagaaaatcattcgaaccgaagaattccatggaacattaaaagaaaagataaaagatcgcttatattcgtattggag ggtggtacgtaaccctatctatatcctgcttgaaatccaacatgtcagcgtcatcatatctgttgggggatacattgcct ttctatctaagtacatcacaagacagttcggagtacctttacatatagcgaattatattttagcgggaacaaatctgtca tcggttgcactgggtgccttttttggcggcttgataacaagaaggattccaatgactccaagaaatggcttcaaggtcat tttaatcctcttcgtcattcacaatgctctttttgctgctttattcttcctcggctgtgatcagcaagaaattaaaggac caacaggaattcacaaatttgcaacgagtatttcaaatgaatgttcctcgaaatgtcaatgtgacagcgatgatttcttt ccaatctgtggatcagacggtataaattatcattcgccgtgctacgctggatgtgacgagagtgttcgtggaggaaggtg tatattatcatacatgtacatgataaagaaagaatatcatttttgcactcagatgtattcaaactgcacatgtacaccag atggaaaggcaacagcaggtttctgtaagacggactgtgctatgatttatccttgggccattgtcaatttcctatcttct gtggctggcgccatgaaaattatgcctaattacatcctaatgatcagatgcgtgaaagatactgataaggccacggctct aggcctaagctccttcttgacatcttcccttggacacggtgcttgtgaatattacgacatcggggacttccgttggaagt tccatactttcggttttgttttcaaaatgattgctttattaagttcattgttcgcactatggaaagtttggaactggaag cagtgggacgcagaagccaaaagtcaccatgagaaaacagtccatccaaccgacgaaaaacaaaatatgattgccgatca gaagggacaaagcgacgatactcaaaaccttaaccaactttga |
|
Protein
| Protein ID | pfu_aug1.0_2309.1_15775.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2309.1_15775.t1 MYNGTNKRQNVELQNSLKFSVRFISFSIFYYRKRSVFFIFQNMKSIKTRFFPGLFIVVKDFSVSNQKSSTQGKKPITMGT NVESNGVQYKKKQEFDKLDGDDDPDTECGVGSFRPSFLQCFANVNAFVGTYSFIGMISQTLSVYVNSQVPALEKQFGLNS AESGLVMSFNDIGFFTTILFAASIVRFVHIPRFIYLCMILYGFSGIICSIPHFIAQGQGLLDNFYIESSIVVDSNNTMPK ESKPDLLCDATRILKNISDLGNCATDSESKLAQLISPSISIKKTALGLIGIGMVLQGIGKAPRGAAFTVRLKQSEKDKAK GKKIIRTEEFHGTLKEKIKDRLYSYWRVVRNPIYILLEIQHVSVIISVGGYIAFLSKYITRQFGVPLHIANYILAGTNLS SVALGAFFGGLITRRIPMTPRNGFKVILILFVIHNALFAALFFLGCDQQEIKGPTGIHKFATSISNECSSKCQCDSDDFF PICGSDGINYHSPCYAGCDESVRGGRCILSYMYMIKKEYHFCTQMYSNCTCTPDGKATAGFCKTDCAMIYPWAIVNFLSS VAGAMKIMPNYILMIRCVKDTDKATALGLSSFLTSSLGHGACEYYDIGDFRWKFHTFGFVFKMIALLSSLFALWKVWNWK QWDAEAKSHHEKTVHPTDEKQNMIADQKGQSDDTQNLNQL |
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