Gene
| Gene Model ID | pfu_aug1.0_2309.1_15777 |
|---|---|
| Locus | scaffold2309.1 : 36611 ... 47192 : - |
| To GenomeBrowser | scaffold2309.1:36611..47192 |
| Genes list of scaffold | scaffold2309.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2309.1_15777.t1 | 3 | 1 | Otopetrin | 9 | 55 | 0.0 | 239.0 | 0.48 | 7100.0 | -4.4 |
| pfu_aug1.0_2309.1_15777.t1 | 3 | 2 | Otopetrin | 107 | 172 | 0.0 | 239.0 | 6.4e-13 | 9.6e-09 | 34.7 |
| pfu_aug1.0_2309.1_15777.t1 | 3 | 3 | Otopetrin | 176 | 438 | 0.0 | 239.0 | 0.0 | 0.0 | 213.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2309.1_15777.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2309.1_15777.t1 agatggtttggtaacaataatcagtggtctatatgggattctactggttgtagtcagttcagcagtgacaatagcagaag tcttcatccggccaacacgacccatgtcgtttgagttgctattcatatacctatacctaacaagcatcttattcctcgtc tatgtttacatcttccttcttcatgatcataccctcagcacaaagaggttacgaaaagccatatcacgtgtcagtctgcg gggattcagcagacgagatgtcaataattccagcacaaatgacgacactggttcagtgttcatgtcagcagaaacggcaa gatttggcataggcagtttagttttagacggacttacgttaggggagcacttcgatgaaagaaaggcgtcgaagattgaa tgccgaaatacactgttcacgattaaagacattttgaaactcgtcttcacgttcactcaactttacttcgtatttgtcaa ttcaaaggctacattgaatcacactgtcttagcaaaagtcgatatgacgttaccttatatcattttctatgattttatca tatctacaggggtactgtttgtgatgtggcagaatattggaaaacgtcatcccagaccctcattagccaatctcatggca tcagccgaagacggacaggatggaagttcaaaacggactcaccgaatgagcgttgattgttcaagctctaatagaggact tttcatgggattattccttttcgttgccctgattatttcccttgtatgtttctactccatgcttcacgaagtcgaatacg aatctgaagttatcctgttgtcatatgctactgaaactattgtgtattcaatagccttagtttcgactatttgtgcagga ttgcgaatgtgtagcttgaaagttaatctgaaaatgaaatcggatcggttggaggaaacgttgattttcatatctttgtc gggactgtacttgttcgggttaatcagcttgattccaggggtctttaacactgataaagtagacgggattatgtcagtag tgaccggcgtcctgtctgttatacaggcaacattacaaacagttttcatgctttcggcaatgaggttttcagcaagaaac atgcatcaggtgactaaaaaaccagggagagaatttgtgacatttttgcttcttaccaacttttctatgtggatgatcaa tacacttgagacacaaaagcccgagcacaacaagatgcaacttgagttgtatggtccgaatgcgtggtccattcttgtac atgtttctgtaccacttggaatattttaccgctttcattcgaccgtgtgcttgtctcacatttggaaaaatgcatggaag atgaaatga |
|
Protein
| Protein ID | pfu_aug1.0_2309.1_15777.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2309.1_15777.t1 DGLVTIISGLYGILLVVVSSAVTIAEVFIRPTRPMSFELLFIYLYLTSILFLVYVYIFLLHDHTLSTKRLRKAISRVSLR GFSRRDVNNSSTNDDTGSVFMSAETARFGIGSLVLDGLTLGEHFDERKASKIECRNTLFTIKDILKLVFTFTQLYFVFVN SKATLNHTVLAKVDMTLPYIIFYDFIISTGVLFVMWQNIGKRHPRPSLANLMASAEDGQDGSSKRTHRMSVDCSSSNRGL FMGLFLFVALIISLVCFYSMLHEVEYESEVILLSYATETIVYSIALVSTICAGLRMCSLKVNLKMKSDRLEETLIFISLS GLYLFGLISLIPGVFNTDKVDGIMSVVTGVLSVIQATLQTVFMLSAMRFSARNMHQVTKKPGREFVTFLLLTNFSMWMIN TLETQKPEHNKMQLELYGPNAWSILVHVSVPLGIFYRFHSTVCLSHIWKNAWKMK |
|