Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_23122.1_11514
Locus scaffold23122.1 : 4093 ... 9301 : -
To GenomeBrowser scaffold23122.1:4093..9301
Genes list of scaffold scaffold23122.1
Synonym pfu_aug2.0_189.1_30374

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_23122.1_11514.t1 1 1 Ependymin 23 138 9.8e-16 57.6 8.6e-20 1.3e-15 57.3

Transcript
Transcript IDpfu_aug1.0_23122.1_11514.t1
Definition-
>pfu_aug1.0_23122.1_11514.t1
tttcagggcgagttacattatgactacaataacaagatgatgttcgtcagaaggagtgctccaggtatggacaagatgga
catcaccattgactataacaagaatcgtatgtacatccagggaaaggattattgtgtgtaccaacccaacacagatccca
tgagagcaccctgtgtgccagacaattccacgtacttgggacgtagcctctttggttccctgaacaatcatattgaagta
gattcatggcgtatgaacttccaagatacatcaatgaaaatctccgtgactactgatggaaactgcattcctgtattcga
atccactcttagtgcaacacagcagctcaccctttttgtcagcaatgttaccaagaccatagacatgtccttgtttgcca
tacccaaaaactgtatccccatccccaccccaccatcgtctacataa

Protein
Protein IDpfu_aug1.0_23122.1_11514.t1
Definition-
>pfu_aug1.0_23122.1_11514.t1
FQGELHYDYNNKMMFVRRSAPGMDKMDITIDYNKNRMYIQGKDYCVYQPNTDPMRAPCVPDNSTYLGRSLFGSLNNHIEV
DSWRMNFQDTSMKISVTTDGNCIPVFESTLSATQQLTLFVSNVTKTIDMSLFAIPKNCIPIPTPPSST

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