Gene
| Gene Model ID | pfu_aug1.0_231282.1_72146 |
|---|---|
| Locus | scaffold231282.1 : 1 ... 669 : - |
| To GenomeBrowser | scaffold231282.1:1..669 |
| Genes list of scaffold | scaffold231282.1 |
| Synonym | pfu_aug2.0_38.1_26721 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_231282.1_72146.t1 | 1 | 1 | Ribosomal_L36e | 2 | 69 | 1.8e-33 | 114.4 | 2.7e-37 | 2.0e-33 | 114.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_231282.1_72146.t1 | gi|188572552|gb|ACD65182.1| | putative 60S ribosomal protein RPL36 [Phoronis muelleri] | 9.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 2 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_231282.1_72146.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_231282.1_72146.t1 gcttgtacaaagcatgcacgatttgtgcgggatttggtgagggaagtaacaggttttgccccttacgagagaagaattca ggaattgctgagaatttccaaggacagaagagcactcaagtttgcaaagaaaaggttgggttcacacatccgcgccaaga ggaagagggaagaaatgcagaatgtgttacagaagatgagaaaagcaaaggatcacaagtga |
|
Protein
| Protein ID | pfu_aug1.0_231282.1_72146.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_231282.1_72146.t1 ACTKHARFVRDLVREVTGFAPYERRIQELLRISKDRRALKFAKKRLGSHIRAKRKREEMQNVLQKMRKAKDHK |
|