Gene
| Gene Model ID | pfu_aug1.0_23129.1_26065 |
|---|---|
| Locus | scaffold23129.1 : 14356 ... 24265 : - |
| To GenomeBrowser | scaffold23129.1:14356..24265 |
| Genes list of scaffold | scaffold23129.1 |
| Synonym | pfu_aug2.0_920.1_01244 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | CARP8 |
| Description | reciprocal BLASTN hit to NCBI Accession AB557933 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23129.1_26065.t1 | 1 | 1 | Carb_anhydrase | 22 | 199 | 0.0 | 156.7 | 0.0 | 0.0 | 156.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_23129.1_26065.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23129.1_26065.t1 atgatctgctccgtgcgcaccgtcaaagtacaagagtgcttagatgggtacatgtacgctagagcatcggaatgggataa acactttccggaagcaaacggcaaatgtcagtctcctatcaacttggtatcagagtgcgcatgcttcgaccaacaattac tcaaacatccgctctccgtgaactacacaacatctcgcgagactgatattttgaatgacggccagaatgtgataatatac ccaagatacaaaggagtgatatcagggggacctttgccgagtggttacgaatttgaattgagtgaaattcgcttccattg gggacgttacagtacccgaggatcggagcacaaagtcaacgggaaagcctttcctatggaggttcagttggtgcactgga actccagtcagtaccagtcatatgagactgctctagggaaagactctggtgttgtgattctatctttatttgtccagatc ggaaaagacaattctgggctgagatctttatttccagattccttgaatgaaatcgcatacaagggtcgacagaagaccac caatgctccgttcaacccttcatgccttttaccaggtaaggttaatgttgaactataa |
|
Protein
| Protein ID | pfu_aug1.0_23129.1_26065.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23129.1_26065.t1 MICSVRTVKVQECLDGYMYARASEWDKHFPEANGKCQSPINLVSECACFDQQLLKHPLSVNYTTSRETDILNDGQNVIIY PRYKGVISGGPLPSGYEFELSEIRFHWGRYSTRGSEHKVNGKAFPMEVQLVHWNSSQYQSYETALGKDSGVVILSLFVQI GKDNSGLRSLFPDSLNEIAYKGRQKTTNAPFNPSCLLPGKVNVEL |
|