Gene
Gene Model ID | pfu_aug1.0_23129.1_26065 |
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Locus | scaffold23129.1 : 14356 ... 24265 : - |
To GenomeBrowser | scaffold23129.1:14356..24265 |
Genes list of scaffold | scaffold23129.1 |
Synonym | pfu_aug2.0_920.1_01244 |
Manual annotation
Study field | Biomineralization |
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Gene name | CARP8 |
Description | reciprocal BLASTN hit to NCBI Accession AB557933 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_23129.1_26065.t1 | 1 | 1 | Carb_anhydrase | 22 | 199 | 0.0 | 156.7 | 0.0 | 0.0 | 156.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 2 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_23129.1_26065.t1 |
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Definition | - |
>pfu_aug1.0_23129.1_26065.t1 atgatctgctccgtgcgcaccgtcaaagtacaagagtgcttagatgggtacatgtacgctagagcatcggaatgggataa acactttccggaagcaaacggcaaatgtcagtctcctatcaacttggtatcagagtgcgcatgcttcgaccaacaattac tcaaacatccgctctccgtgaactacacaacatctcgcgagactgatattttgaatgacggccagaatgtgataatatac ccaagatacaaaggagtgatatcagggggacctttgccgagtggttacgaatttgaattgagtgaaattcgcttccattg gggacgttacagtacccgaggatcggagcacaaagtcaacgggaaagcctttcctatggaggttcagttggtgcactgga actccagtcagtaccagtcatatgagactgctctagggaaagactctggtgttgtgattctatctttatttgtccagatc ggaaaagacaattctgggctgagatctttatttccagattccttgaatgaaatcgcatacaagggtcgacagaagaccac caatgctccgttcaacccttcatgccttttaccaggtaaggttaatgttgaactataa |
Protein
Protein ID | pfu_aug1.0_23129.1_26065.t1 |
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Definition | - |
>pfu_aug1.0_23129.1_26065.t1 MICSVRTVKVQECLDGYMYARASEWDKHFPEANGKCQSPINLVSECACFDQQLLKHPLSVNYTTSRETDILNDGQNVIIY PRYKGVISGGPLPSGYEFELSEIRFHWGRYSTRGSEHKVNGKAFPMEVQLVHWNSSQYQSYETALGKDSGVVILSLFVQI GKDNSGLRSLFPDSLNEIAYKGRQKTTNAPFNPSCLLPGKVNVEL |