Gene
| Gene Model ID | pfu_aug1.0_2320.1_58864 |
|---|---|
| Locus | scaffold2320.1 : 7336 ... 17310 : + |
| To GenomeBrowser | scaffold2320.1:7336..17310 |
| Genes list of scaffold | scaffold2320.1 |
| Synonym | pfu_aug2.0_597.1_24212 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2320.1_58864.t1 | 1 | 1 | HCO3_cotransp | 1 | 160 | 0.0 | 271.0 | 0.0 | 0.0 | 270.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2320.1_58864.t1 | gi|26000552|gb|AAN75454.1| | Na-dependent Cl/HCO3 exchanger [Doryteuthis pealeii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2320.1_58864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2320.1_58864.t1 atggatcaacagattacagcggttatcgtcaacaggaaagaaaacaaactgaagaaaggtcatggttaccatttggacct gctgattatagccgtattagtcatactgaactcgtttatgggacttccctggttcgtggctgccaccgtactgtctatta cgcatgttgtcagtttacagaaggagtcggaatgtactgcacctggtgaaagacccaaatttctaggagtcagggaacag agagcgactggtgtagctatctttctgatgattggaatttctactgtaatgactaatgtattaagggccattccaatgcc agtactatatggtgttttcctgtatatgggtatatcttcactccgaggcatgcagatagtacagagaatcctgatctggt tcagcccagccaagtatcaacctgattacatgtatctcagacacgtaaaaacaaatcgtgtacatctgttcacagctatc caagtcttctgtctagtgttattgtgggtgataaagagcatcaaagagacctccattgctttcccaataatggtgctggc catgtgcttcataaggaagggtatggacaaaatcttcactcagacggagttaaaatggctggatgacgtcatgccggaat ctcacaaacggaagaaggaggaggacggtaaaggagaagaggaaattgagatgactggtccagacggtagtaattctgta atggttcccctggatggtggaaacgtactcaacatcccagtcaacatgaccactagtgcaaccgaccagtcctttaatat atctgaggaaatggccaagacttctttgtggaaaaacatgatgaataatgatatgaacaacaaatccaacagtcctacca aaccaagaaaaaggaacaagggaaaccaccgggactattcacctagtgatgctttacccacaattcccagcagtccaacg gaaatggatcagaaagacaagaagaaaggaaagaaaccattcttttacattgacgaggaagagaaagaacaacttctcca caagcctccacaaatagtggttgatcccccgagctacgacagtgccattggtgactag |
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Protein
| Protein ID | pfu_aug1.0_2320.1_58864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2320.1_58864.t1 MDQQITAVIVNRKENKLKKGHGYHLDLLIIAVLVILNSFMGLPWFVAATVLSITHVVSLQKESECTAPGERPKFLGVREQ RATGVAIFLMIGISTVMTNVLRAIPMPVLYGVFLYMGISSLRGMQIVQRILIWFSPAKYQPDYMYLRHVKTNRVHLFTAI QVFCLVLLWVIKSIKETSIAFPIMVLAMCFIRKGMDKIFTQTELKWLDDVMPESHKRKKEEDGKGEEEIEMTGPDGSNSV MVPLDGGNVLNIPVNMTTSATDQSFNISEEMAKTSLWKNMMNNDMNNKSNSPTKPRKRNKGNHRDYSPSDALPTIPSSPT EMDQKDKKKGKKPFFYIDEEEKEQLLHKPPQIVVDPPSYDSAIGD |
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