Gene
| Gene Model ID | pfu_aug1.0_23256.1_62211 |
|---|---|
| Locus | scaffold23256.1 : 1 ... 5513 : + |
| To GenomeBrowser | scaffold23256.1:1..5513 |
| Genes list of scaffold | scaffold23256.1 |
| Synonym | pfu_aug2.0_101.1_03619 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23256.1_62211.t1 | 4 | 1 | zf-C2H2 | 14 | 36 | 1.7e-15 | 56.3 | 5.5e-05 | 0.029 | 14.6 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 1 | zf-C2H2_4 | 15 | 36 | 7.4e-16 | 57.2 | 6.6e-05 | 0.035 | 14.4 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 2 | zf-C2H2_4 | 42 | 62 | 7.4e-16 | 57.2 | 0.00051 | 0.27 | 11.6 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 2 | zf-C2H2 | 43 | 62 | 1.7e-15 | 56.3 | 0.00015 | 0.077 | 13.3 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 3 | zf-C2H2_4 | 68 | 90 | 7.4e-16 | 57.2 | 2.8e-06 | 0.0015 | 18.7 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 3 | zf-C2H2 | 68 | 90 | 1.7e-15 | 56.3 | 9.5e-05 | 0.05 | 13.9 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 4 | zf-C2H2_4 | 96 | 118 | 7.4e-16 | 57.2 | 4.9e-08 | 2.6e-05 | 24.2 |
| pfu_aug1.0_23256.1_62211.t1 | 4 | 4 | zf-C2H2 | 97 | 118 | 1.7e-15 | 56.3 | 1.9e-09 | 1.0e-06 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23256.1_62211.t1 | gi|194220149|ref|XP_001918384.1| | 8.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_23256.1_62211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23256.1_62211.t1 gttctatcgggaacaaagacggaactgcattcactgataccacttgtccaagatgtaaaaccaactttgaaactccagct cttctaaaggaacatttccagtctgtccatgatgtttacgccatctgtaaatgtggtcgagcttttaaaaccccctactc ctacagctatcattataaagtgaaacacagagagaaaaaagtgttctcttgtcctatttgtggagtgacgtcagtttatt tctccagcatgaagcgacatcttgcaaaacattcagacactagtcgatggtcttgtcatatttgtggaaaatcatatagc agaaaagacagtctcaagtcacacatgacaagtcactcggttgatgtacaaaacgttgaccaagacatcatcagtcaaat gacttcacagacaagtttgtcttcaactttgagccatggtggtggattcatgatagtgccccagccttcaaattctgata actcagaaaatctagaatcgacaccttga |
|
Protein
| Protein ID | pfu_aug1.0_23256.1_62211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23256.1_62211.t1 SIGNKDGTAFTDTTCPRCKTNFETPALLKEHFQSVHDVYAICKCGRAFKTPYSYSYHYKVKHREKKVFSCPICGVTSVYF SSMKRHLAKHSDTSRWSCHICGKSYSRKDSLKSHMTSHSVDVQNVDQDIISQMTSQTSLSSTLSHGGGFMIVPQPSNSDN SENLESTP |
|