Gene
| Gene Model ID | pfu_aug1.0_233.1_22095 |
|---|---|
| Locus | scaffold233.1 : 22616 ... 31990 : + |
| To GenomeBrowser | scaffold233.1:22616..31990 |
| Genes list of scaffold | scaffold233.1 |
| Synonym | pfu_aug2.0_255.1_17183 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_233.1_22095.t1 | 1 | 1 | Dynamin_N | 61 | 221 | 1.6e-22 | 80.1 | 3.1e-25 | 3.0e-22 | 79.2 |
| pfu_aug1.0_233.1_22095.t1 | 1 | 1 | MMR_HSR1 | 61 | 220 | 3.8e-09 | 36.4 | 1.3e-11 | 1.3e-08 | 34.8 |
| pfu_aug1.0_233.1_22095.t1 | 1 | 1 | EF-hand_4 | 443 | 532 | 1.6e-18 | 66.3 | 4.8e-21 | 4.7e-18 | 64.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_233.1_22095.t1 | gi|321469395|gb|EFX80375.1| | hypothetical protein DAPPUDRAFT_304007 [Daphnia pulex] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_233.1_22095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_233.1_22095.t1 atgaagcggtggttgtcgggtgacgaccgacgtcgtaaggaacctgaagtgttcaatagcgtagcagacggtcttaaatc tctgtataaacagaagttgttacctcttgaggaacattacaaatttcacgattttcattctccccaacttgacgatcccg attttgatgctaagcccatgatcttacttataggacaatattcgaccgggaaaaccacgttcatcaggtatctactggag caagactttccaggaatccgtatcggcccagaaccaaccactgatcgcttcatagctgttatgggcggtgaacaagaggg ggtagtgccaggaaacgcccttgttgttgataccaaaaagcaatttcgaccacttacaaaatttggcaatgctttcctta accgttttcagtgttccactctgagtaatccagtatgtgacagtttgacaatcattgacactcctggaattctgtctggt gagaaacaacgtgttgatcggggatatgattttgcaggtgttctagaatggtttgcagagagagtagacagaattcttct cctctttgatgcacacaaacttgacatttctgatgaattccgccgtgcaatagatgccatcaagggctatgatgacaaaa tccgtatagttttaaacaaggcagatatggttgaccatcagcagttgatgcgagtatatggtgctttgatgtggtcatta ggtaaagttctcaacaccccagaagtagctcgggtctatataggatctttctgggacaatccattgcagtttgacatgaa tagaaagctgttcgaactggaggaacaagatttattcaatgacctgcagagtcttcctagaaacgctgcgctgagaaaac tgaatgacctcattaagagagccagacttgcaaaggtacatgcgtacatcattagttcattacaaaaggggatgccgtca atgtttggaaaggattccaagaaaaaagaaatgatcaagaacctaggagagacctacgcacagatagagagggaccacaa aatttctaggggcgattttcctgatttagctcgtatgaaagagcagctacagcatcacgacttctccaaattccatccaa taaaaattaagctactggaagcagtcgatcatatgttggccaatgatatcgctcgtctcatgcagatgattcctaacgag gaagcagtcatgtccaaggcgccagcggtcaggggcggggcctttgacaccatgaacgacagcaagtttggatacggtag aggcgaaggagtggatgaaggtagaggggagctggaatggatcgtcgggcaggaaaaatataaatacgacgaggcgtttg aaaagctgaatcccgtaaatggcaaaatcactggtgccgctgccaaatccgaaatggtgaaatccaaacttcccaacgcc gtgctgggtaaggtttggaaattgtcagacattgaccaggatggaatgttggatgaagatgaatgggcgttggccaatca cctgatcaagatcaagttggacggacacgacttaccagcaactctaccagaccatcttataccgccctcaaagaaaaaag gattttga |
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Protein
| Protein ID | pfu_aug1.0_233.1_22095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_233.1_22095.t1 MKRWLSGDDRRRKEPEVFNSVADGLKSLYKQKLLPLEEHYKFHDFHSPQLDDPDFDAKPMILLIGQYSTGKTTFIRYLLE QDFPGIRIGPEPTTDRFIAVMGGEQEGVVPGNALVVDTKKQFRPLTKFGNAFLNRFQCSTLSNPVCDSLTIIDTPGILSG EKQRVDRGYDFAGVLEWFAERVDRILLLFDAHKLDISDEFRRAIDAIKGYDDKIRIVLNKADMVDHQQLMRVYGALMWSL GKVLNTPEVARVYIGSFWDNPLQFDMNRKLFELEEQDLFNDLQSLPRNAALRKLNDLIKRARLAKVHAYIISSLQKGMPS MFGKDSKKKEMIKNLGETYAQIERDHKISRGDFPDLARMKEQLQHHDFSKFHPIKIKLLEAVDHMLANDIARLMQMIPNE EAVMSKAPAVRGGAFDTMNDSKFGYGRGEGVDEGRGELEWIVGQEKYKYDEAFEKLNPVNGKITGAAAKSEMVKSKLPNA VLGKVWKLSDIDQDGMLDEDEWALANHLIKIKLDGHDLPATLPDHLIPPSKKKGF |
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