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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_23314.1_18928
Locus scaffold23314.1 : 1 ... 13895 : -
To GenomeBrowser scaffold23314.1:1..13895
Genes list of scaffold scaffold23314.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_23314.1_18928.t1 1 1 OATP 6 142 8.3e-10 37.3 6.5e-14 9.7e-10 37.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_23314.1_18928.t1 gi|291238789|ref|XP_002739312.1| PREDICTED: major facilitator superfamily domain-containing protein 3-like [Saccoglossus kowalevskii] 8.0e-23

Transcript
Transcript IDpfu_aug1.0_23314.1_18928.t1
Definition-
>pfu_aug1.0_23314.1_18928.t1
atgtttgtaccctctcaatacagacaagaatcaaacaaatctgaagaaaaacaagaagacattggtgataaagaaaccca
tgaagagctgggtgagacaggtggaaagcttccatggtttatacaacactttattagaatatttcagacacctgggacaa
agtggatggcaatgtatgtgctactatataagctaggtgagcaaggagccctaagtatggtgcccatgtttttgattgat
aaaggcatagctgcatctcaagtaggattttggacaggaatggttggtcaagcagtgtccattgttggttcttttatggg
tggaaccatcatctcacacttgagatggagcacgaggaatcttctccaagtgttgagtattgtgaggatggttccactgt
tgattcagttttgtgttgtatgttactggtcagaaagttcctcatcatatttgtatggtaaaaggttgccgttacggtta
ag

Protein
Protein IDpfu_aug1.0_23314.1_18928.t1
Definition-
>pfu_aug1.0_23314.1_18928.t1
MFVPSQYRQESNKSEEKQEDIGDKETHEELGETGGKLPWFIQHFIRIFQTPGTKWMAMYVLLYKLGEQGALSMVPMFLID
KGIAASQVGFWTGMVGQAVSIVGSFMGGTIISHLRWSTRNLLQVLSIVRMVPLLIQFCVVCYWSESSSSYLYGKRLPLRL

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