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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_23363.1_11528
Locus scaffold23363.1 : 9053 ... 20475 : -
To GenomeBrowser scaffold23363.1:9053..20475
Genes list of scaffold scaffold23363.1
Synonym pfu_aug2.0_1017.1_24607

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_23363.1_11528.t1 1 1 Gtr1_RagA 1 166 0.0 228.1 0.0 0.0 227.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_23363.1_11528.t1 gi|345777789|ref|XP_531945.3| 0.0

Transcript
Transcript IDpfu_aug1.0_23363.1_11528.t1
Definition-
>pfu_aug1.0_23363.1_11528.t1
atggagaactactttgccagccagagagacaacatattcaggaacgtagaagtgttgatatatgtgtttgacgttgagag
tcgagagttggagaaggacatgcattattaccagtcttgtctggaagccatcttgcagaattctccagatgctaaggtct
tctgtttggtccataaaatggacctggtccaagatgatcaaagagatatgatattcagggagagagaggaagatttacag
agattatctaagcccctccattgtacctgctttgctacatctatatgggatgaaactttgtataaggcttggtccagtat
agtttatcagctgatccctaacgtacaacaactagaaagtaatttgtccaattttgccagcattattgatgcagatgaag
ttctcctgtttgaaagagcaacatttttggtaatatcacattgtgagagaaaacaacacagagatgtacacaggtttgag
aagataagtaacatcatcaaacagttcaaactgagctgtagtaaactagcggcttcgttccagagtatggaggtgatgaa
ttcttgttttgctgcttacatagacacgttcacatccaatacatacgttatggtcgtcatgtcagatccctcaataccct
cagcagcaacactgatcaacataaagaatgcgaagaagcactttgagaaattagagaggatagatcaaggaaattcctcc
atagctggaaagtaa

Protein
Protein IDpfu_aug1.0_23363.1_11528.t1
Definition-
>pfu_aug1.0_23363.1_11528.t1
MENYFASQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKVFCLVHKMDLVQDDQRDMIFREREEDLQ
RLSKPLHCTCFATSIWDETLYKAWSSIVYQLIPNVQQLESNLSNFASIIDADEVLLFERATFLVISHCERKQHRDVHRFE
KISNIIKQFKLSCSKLAASFQSMEVMNSCFAAYIDTFTSNTYVMVVMSDPSIPSAATLINIKNAKKHFEKLERIDQGNSS
IAGK

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