Gene
| Gene Model ID | pfu_aug1.0_2341.1_08295 |
|---|---|
| Locus | scaffold2341.1 : 27742 ... 53955 : - |
| To GenomeBrowser | scaffold2341.1:27742..53955 |
| Genes list of scaffold | scaffold2341.1 |
| Synonym | pfu_aug2.0_52.1_06828 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2341.1_08295.t1 | 3 | 1 | DHC_N2 | 5 | 65 | 4.7e-39 | 134.0 | 1.5e-14 | 1.7e-11 | 43.2 |
| pfu_aug1.0_2341.1_08295.t1 | 3 | 2 | DHC_N2 | 100 | 221 | 4.7e-39 | 134.0 | 2.4e-30 | 2.8e-27 | 95.2 |
| pfu_aug1.0_2341.1_08295.t1 | 1 | 1 | AAA_7 | 322 | 500 | 7.6e-38 | 130.1 | 1.50001e-40 | 1.7e-37 | 128.9 |
| pfu_aug1.0_2341.1_08295.t1 | 2 | 1 | AAA_8 | 595 | 628 | 5.9e-35 | 120.5 | 1.5e-05 | 0.017 | 14.1 |
| pfu_aug1.0_2341.1_08295.t1 | 2 | 2 | AAA_8 | 656 | 788 | 5.9e-35 | 120.5 | 4.1e-33 | 4.6e-30 | 104.4 |
| pfu_aug1.0_2341.1_08295.t1 | 1 | 1 | MT | 803 | 1111 | 5.0e-40 | 137.2 | 7.20267e-43 | 8.20001e-40 | 136.6 |
| pfu_aug1.0_2341.1_08295.t1 | 3 | 3 | DHC_N2 | 1044 | 1095 | 4.7e-39 | 134.0 | 0.11 | 130.0 | 0.9 |
Transcript
| Transcript ID | pfu_aug1.0_2341.1_08295.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2341.1_08295.t1 atggatatcaaaccacaagcagagacgtcactgaacaacatgttagagtttggtctggccaaacatctacagaggttaga ggagattggtgcggcagcggccaaagaacactcactggagaaggcactggagaagatgaaggcagactggaaggatatgt gctttgaaatggttccttacagagatacttattacatttattatattggtatccatttttatgcccccgtaatagtagat tttttgggcataaagtttttgtcgtgtccctttgtccgcttgtccttggccataacttttgaatggttcttctttctgtc aaatgatgagttgctagaaatcttatcagaaaccaaggatccattgagagttcagccacacttgaagaagtgctttgagg gtatcagccgcctagagtttaatgatcagcaagaaattcttggtatgatttcggctgagaatgaagtggtgccattcaac tcaaagattgtacctgctaaagcaaagaatctatcaccagacatgatcagggacaaggaaatccaacccgagtgtccaga atatgcttgtactaggggtatggtggaaaaatggctgctacaggtagaggatgtaatgatcagtagtttacgtaaagtga tcatggagtctatcgatgcctacgagcctacaccacgtaaccgctgggtgctggaatgggcaggtcaggtggttatatgt tcaagctccatcttttggacgcaggaggtagaggccagcatgaaggagaaagatggtttacagaaatacttacttaaatg caacggtcaaattgaccagattgtgcagttagtgagaggaaagttggaccctggacacagagttactctgggagccctca ctgtcattgatgtacatgtgcctctgaagtacttgggtgaaatgaatcgagaacttctttttattttacgaaggaagggt ctgtttggtccgcccatggggaagaagtctgtagtatttgtagacgatctgaacatgccagccaaggagaagtacggagc ccagcctcctatagagttattacgtcaatggttagaccatggacattggtatgataggaaggatacatccaaaatcttct taactgacgtgctctttgtgtcagcaatgggtccaccaggaggtggaagaaatgacattaccagtcgattcactcgacat ttgaacataatgggtatagatgaatttgatgaaggtaccctcaccaagattttcacatctatcactgactggcattttgg caaaggatttgatggttcatttgtaaggaatggaaagcttctagttgctgctaccatggccgtctatcaagatgccatca agaacttcctgccaacaccggcaaagagtcactatgtcttcaacctgagagattttgcccgtgtgatacgaggtgtttta ctggttcccagcactcatatgagtgatactgagaaactacagagattatggattcatgaagtttaccgtgtcttttatga tcgtttaacagacccagaggatagattaatgtttttcaacatagtgaaggaacagtgctccaatcacttcaaggctaata ttgataaaatattgggtcatttatccaagagtggcaaggtgatagatgacaatgttagatccctcttctttggagattat atgagtcaggaaggaagtaaaacatacgatgaagtctctgatctaaaagagcttacagctgctatggaaaactatcttga tgagtacaacttgatcagtaaggcaccaatgaggctagtcatgttcaagtttgctattgagcacatttctcgtgtaagcc gtgtacttctacaggacaatggccatgcacttcttgttgctgtgattgtttacaagtactataaaatctataatattaag tttcattggtcatttgcttttgagaaacaagcccagcttttcatcaagaaagttgtgaagggtaagaagatggatgccac acctttggcaatgtataactactttatagaccgagtcaaacagaatcttcacattgtcctggcaatgagtcccatcggag atgcgttccgtaacagactaaggatgtttccttcattgattaactgttgtaccatagattggttccagaaatggccatct gatgcgttggagatggtagctaataaattcttagaggaggtggaactggaggaccatgtacgtaaagagagtgtggttat gtgtaaacatttccatgagagtgtaggcatcctctctgatggcttttttgatcagttaaggagacataattacgtaactc caacatcttaccttgaactgataatgacatttaaatcactcttgggtgtcaagcgtgatgaaatatacacactgagaaat cgttatcttgttggacttgagaagttagaatttgccgcttcccaagtgtcagttatgcaacaggaattacaagatcttca accagaactgataaaaacatctgaggaaacagaaaaactaatgatcaagattgagcaggacacagtagaagttgaagcta agaaggaagtggtagccgctgatgaagcggtggctaatgaagccgcagccgccgcccaggccattaaagatgaatgtgag agtgacttggcagaagccataccagcactggaggcagctatacaggctctcaacactctaaaaccagctgatatcacact ggtcaagtctatgaagaatccccctcctgctgtaaaacttgtcatggagtctatatgtgtcatgttagccattaaatctg agagaaaacctgatccatctggaactggcaaaatgattgaagatttctggggaccgtctcaaaagctgcttggagatctg aaatttctggaaaagttaaaaagttatgacaaagataacattccggtaccaatcatcaaaaggataagagaaaagtacat aagtaatccagaatttgaccctgtactgattaagaacgcatcaacagcatgtgaaggactatgtagatgggttaaggcca tggatatttatgataaagttgctaaagtcgtggctccaaagaaattgaaactagcagaggcagaaggtgaattagctgtg caaatggaaaaactgaatgaaaagagagcacaactgaaagaagttacagacaaattacaagctttgaatgatgaatttga agccatgacacaaaagaagaaagagcttgaaaccaacattgacatctgtgagaagaaactagatcgtgctgagaaactga tcggtggtcttggaggtgagaaagacagatggacggaagcagctcgcgtgctcggtcaagccaacaaatgggtgaaaaac atggaaaaaagtaacaaacttagcataataaaactgtctgatgcaaattacatcagaacgctggaaaattccatccagtt tggctctccagtgcttctagagaatgttgacgatatccgacgtaaaacaatttgtgacgtcatgaaaatgaagcgcatgt ttatgtag |
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Protein
| Protein ID | pfu_aug1.0_2341.1_08295.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2341.1_08295.t1 MDIKPQAETSLNNMLEFGLAKHLQRLEEIGAAAAKEHSLEKALEKMKADWKDMCFEMVPYRDTYYIYYIGIHFYAPVIVD FLGIKFLSCPFVRLSLAITFEWFFFLSNDELLEILSETKDPLRVQPHLKKCFEGISRLEFNDQQEILGMISAENEVVPFN SKIVPAKAKNLSPDMIRDKEIQPECPEYACTRGMVEKWLLQVEDVMISSLRKVIMESIDAYEPTPRNRWVLEWAGQVVIC SSSIFWTQEVEASMKEKDGLQKYLLKCNGQIDQIVQLVRGKLDPGHRVTLGALTVIDVHVPLKYLGEMNRELLFILRRKG LFGPPMGKKSVVFVDDLNMPAKEKYGAQPPIELLRQWLDHGHWYDRKDTSKIFLTDVLFVSAMGPPGGGRNDITSRFTRH LNIMGIDEFDEGTLTKIFTSITDWHFGKGFDGSFVRNGKLLVAATMAVYQDAIKNFLPTPAKSHYVFNLRDFARVIRGVL LVPSTHMSDTEKLQRLWIHEVYRVFYDRLTDPEDRLMFFNIVKEQCSNHFKANIDKILGHLSKSGKVIDDNVRSLFFGDY MSQEGSKTYDEVSDLKELTAAMENYLDEYNLISKAPMRLVMFKFAIEHISRVSRVLLQDNGHALLVAVIVYKYYKIYNIK FHWSFAFEKQAQLFIKKVVKGKKMDATPLAMYNYFIDRVKQNLHIVLAMSPIGDAFRNRLRMFPSLINCCTIDWFQKWPS DALEMVANKFLEEVELEDHVRKESVVMCKHFHESVGILSDGFFDQLRRHNYVTPTSYLELIMTFKSLLGVKRDEIYTLRN RYLVGLEKLEFAASQVSVMQQELQDLQPELIKTSEETEKLMIKIEQDTVEVEAKKEVVAADEAVANEAAAAAQAIKDECE SDLAEAIPALEAAIQALNTLKPADITLVKSMKNPPPAVKLVMESICVMLAIKSERKPDPSGTGKMIEDFWGPSQKLLGDL KFLEKLKSYDKDNIPVPIIKRIREKYISNPEFDPVLIKNASTACEGLCRWVKAMDIYDKVAKVVAPKKLKLAEAEGELAV QMEKLNEKRAQLKEVTDKLQALNDEFEAMTQKKKELETNIDICEKKLDRAEKLIGGLGGEKDRWTEAARVLGQANKWVKN MEKSNKLSIIKLSDANYIRTLENSIQFGSPVLLENVDDIRRKTICDVMKMKRMFM |
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