Gene
| Gene Model ID | pfu_aug1.0_2350.1_08301 |
|---|---|
| Locus | scaffold2350.1 : 2364 ... 8415 : - |
| To GenomeBrowser | scaffold2350.1:2364..8415 |
| Genes list of scaffold | scaffold2350.1 |
| Synonym | pfu_aug2.0_3422.1_09138 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2350.1_08301.t1 | 1 | 1 | rve | 324 | 394 | 2.8e-06 | 27.4 | 1.5e-09 | 7.5e-06 | 26.0 |
| pfu_aug1.0_2350.1_08301.t1 | 1 | 1 | Chromo | 660 | 705 | 4.2e-06 | 26.3 | 1.9e-09 | 9.2e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2350.1_08301.t1 | gi|270017072|gb|EFA13518.1| | hypothetical protein TcasGA2_TC001491 [Tribolium castaneum] | 3.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2350.1_08301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2350.1_08301.t1 atggactgtgcggcttacttgctttgtaacttttttgtcgttgaatgcgatcatcgggctttgcaacctttgtttcgcaa aaagttgaaaggtgatatctatgagcgatggttaacgctgttgcagcagtttaattttgacattgtatataaacctgcat cacaaatggtagttgttgatactttatcgcgagagcctatttttgcgaacgattgtaaaccgtttgaaagtcctgacgaa attgacctatattttcccgatataccagaaatgaagggcaacattcgcttaccgactggtcagccgctcatgcaggcctt acgtagtacagattccgatagtgaagttgtccgtgaaacaaacttcattcaagtattgccaacctccttacctcgtagcc aggtagttgatttaaaaggattcgaaagtgatgatggctatgatggagactcagaggacgaaatatctcttctaacgcgg gaaaatgacttaccacgtaaagggctaacaactaagccttcagtttgttctggaatggatttacatggaatagaacccaa agatggaacaattttagaatgttctaggaactccgaacctgtcgaaccgattcaaactactttggcatcagataaacatc cacataatcaatacaatttcgatcagtcacaggatgatgacataggtggagagaacagggatagcattttcgatagcgaa actgaagtggattcagttgacaacttacctgcatacgcttgtaccactgatatgaacactcctaccttcgcagaggaaaa catgtcatcaacatctgacatatttgctcatatagatcaaattcttggaaaaggaaatgtttcaataacctctttaaagg aattacagcacatggatatcagattgaagcctctcttggcctacttacaagaagataagttgccttctgaacagaaactt gcgccaaacaaagatgcgatgccagttgctacagctctgtttgacttattcacaagctatggtgtttgtgaaactttaat tacagactgcggtacagagttcacagcacaagtcacagagaaagtttgcgagctattgcgtttagagaaacagtttacac ctccgtatactcatcattgtctcggagcatgtgggcgcactcacagatacctagcgaaacgcttaacaccatcagtaaag gaagatgagcgtacatgggacacctttttgcaagggactgtattttctatgaacaccactgtgaactcaagttctggatt ttctccatttgaagtgatctatcgacaccgtccaagatttccacttctatcagcagacgtaaatttggacaccgtaccag gagatcatcatgtatttgtagcaaccatgtgtaaacacctagagcacattcgaaccgaaatggaagaacatttagcgaat tcgaaacaatgcatggaggatcgggttaattcgaaatcaaaccctttacaagtgaaaactggagactatgtttacttgtt acatggcggaaattcattaggacgcaaaatacatgataggtaccaaggacctctagttgtacaggaattatgctccgatc acactgtcaagcttcgcaaccctaaaacagggcaaatcagtgattcagtaatacatatgaaccgcttaaagatggtgttt gtgcgtgaaccacatccatcttcatattttctaggtaatgtttcttcgaaaactattattaagcatgtcgacgcacaaac tcaggttttgacggaggagtttatgagtactaccgggcttggtgtggattgtaatcaaagtgatagagacactgctgttc gggtggaagttccacgaatgtcgaatgaaaggccaagtccgaagtcgataccgttgcgtccaaagcgtaacattcggaaa cctttgcgttatcagtcctcatccgcagaaataagtactgactctgcctcacccttttataaaattaagaaaatcatttg tcaacgactttgtgagggtcagaaagagtatttggttcagttttcaggggaaccaacacaaaatacaatgtgggtagctt atgaggatttaaatgcaaaatgtcaaggtctagtcgacgtcaggagtttgcctccccctgttttgaattga |
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Protein
| Protein ID | pfu_aug1.0_2350.1_08301.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2350.1_08301.t1 MDCAAYLLCNFFVVECDHRALQPLFRKKLKGDIYERWLTLLQQFNFDIVYKPASQMVVVDTLSREPIFANDCKPFESPDE IDLYFPDIPEMKGNIRLPTGQPLMQALRSTDSDSEVVRETNFIQVLPTSLPRSQVVDLKGFESDDGYDGDSEDEISLLTR ENDLPRKGLTTKPSVCSGMDLHGIEPKDGTILECSRNSEPVEPIQTTLASDKHPHNQYNFDQSQDDDIGGENRDSIFDSE TEVDSVDNLPAYACTTDMNTPTFAEENMSSTSDIFAHIDQILGKGNVSITSLKELQHMDIRLKPLLAYLQEDKLPSEQKL APNKDAMPVATALFDLFTSYGVCETLITDCGTEFTAQVTEKVCELLRLEKQFTPPYTHHCLGACGRTHRYLAKRLTPSVK EDERTWDTFLQGTVFSMNTTVNSSSGFSPFEVIYRHRPRFPLLSADVNLDTVPGDHHVFVATMCKHLEHIRTEMEEHLAN SKQCMEDRVNSKSNPLQVKTGDYVYLLHGGNSLGRKIHDRYQGPLVVQELCSDHTVKLRNPKTGQISDSVIHMNRLKMVF VREPHPSSYFLGNVSSKTIIKHVDAQTQVLTEEFMSTTGLGVDCNQSDRDTAVRVEVPRMSNERPSPKSIPLRPKRNIRK PLRYQSSSAEISTDSASPFYKIKKIICQRLCEGQKEYLVQFSGEPTQNTMWVAYEDLNAKCQGLVDVRSLPPPVLN |
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