Gene
| Gene Model ID | pfu_aug1.0_2350.1_08302 |
|---|---|
| Locus | scaffold2350.1 : 9454 ... 13505 : - |
| To GenomeBrowser | scaffold2350.1:9454..13505 |
| Genes list of scaffold | scaffold2350.1 |
| Synonym | pfu_aug2.0_3422.1_09137 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2350.1_08302.t1 | 1 | 1 | Retrotrans_gag | 107 | 198 | 1.9e-07 | 31.0 | 5.6e-11 | 4.1e-07 | 29.9 |
Transcript
| Transcript ID | pfu_aug1.0_2350.1_08302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2350.1_08302.t1 atgaccacgccgaaggattatgtgatcaacataggggaccctctctctaatgaacaaatagctagacgtctctcatttag tgactctttaaatgatgatttgcaatcgctgagtgacccatttgattttaattatttccgtacttgttatacgagtagat cgaaacaagagaacatgacttttccccagtttatgatgccaatgccattacacttaagaacattccaaaggtacaatgaa gaggatggtgagaaatttttaaatgactttattgcattttccacgatgagcggtttcgacgatgaccgaagggtgtcggc attctcactgtatcttgctggccctgcatacaactggtacaaaatattagactgtgatatacagagaaactgggattttc tgaaggaaagctttattgagaattacgcaacggcaaatgatgcattgctttactccgaactccaattgtataacgagttg aagttaactgagaaaatgaactttgaggactaccacagcgaaatacttaagcgtggtcgaaagctgaagaagaccgaacc agacatgatgtcgagatttattgatgggcttcaaaggggcttgaaattcttccacatcgttagcagatgccatgcagagt gcgcgaatgggcgatgcgtgtggttacaggaaggacatgggaccggtagctgttcccgggaagatggaaaccccaaccgt ttgcgcgatcgaaaagtacaaagggaggatcgcctttgcaagatcgagcaacaagtagaggtcgtgatgcaatctctctc caagcttcccgatggaccagttgattcttctcctcgcgcgcgtcgtgaatgtcacaagtgcggtgggaaagaccatttca agaacaggtgcaagtggaacggacacggtgtgcgttcaccggacacaatgtgtcaaatctgtacacaaaatggacacggt gctaaagaatgcattgactttcagtttacacggggaaacgacaaaaccccaggcgagacgcgccctcgcctgggccctta a |
|
Protein
| Protein ID | pfu_aug1.0_2350.1_08302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2350.1_08302.t1 MTTPKDYVINIGDPLSNEQIARRLSFSDSLNDDLQSLSDPFDFNYFRTCYTSRSKQENMTFPQFMMPMPLHLRTFQRYNE EDGEKFLNDFIAFSTMSGFDDDRRVSAFSLYLAGPAYNWYKILDCDIQRNWDFLKESFIENYATANDALLYSELQLYNEL KLTEKMNFEDYHSEILKRGRKLKKTEPDMMSRFIDGLQRGLKFFHIVSRCHAECANGRCVWLQEGHGTGSCSREDGNPNR LRDRKVQREDRLCKIEQQVEVVMQSLSKLPDGPVDSSPRARRECHKCGGKDHFKNRCKWNGHGVRSPDTMCQICTQNGHG AKECIDFQFTRGNDKTPGETRPRLGP |
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