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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_23511.1_40427
Locus scaffold23511.1 : 1 ... 5245 : -
To GenomeBrowser scaffold23511.1:1..5245
Genes list of scaffold scaffold23511.1
Synonym pfu_aug2.0_210.1_00438

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_23511.1_40427.t1 1 1 Pkinase_Tyr 3 130 6.7e-23 81.0 3.2e-26 8.0e-23 80.8
pfu_aug1.0_23511.1_40427.t1 1 1 Pkinase 4 129 1.9e-38 132.0 9.19952e-42 2.3e-38 131.8

Transcript
Transcript IDpfu_aug1.0_23511.1_40427.t1
Definition-
>pfu_aug1.0_23511.1_40427.t1
atggtagagaacgaagtatctattatgcgaaaagtaaatcatccgaatataatattgctagttgaagagctagacaccag
ggacgagttgtatttagtcatggaatacgtcaagggcggcgacttatttgatgacatcacgatgtcaacgaaatatacag
aaaaagacgcaagtggaatgatattcaacttagcaagtgcactgaaatatcttcatggcttaaaaattgtgcatagggat
gtaaaaccagaaaatctattggtatctatgcactctgatggttcaaagtccctgaagttaggtgattttggtttagccac
atattgtgaggagactctctatactgtatgtggcactcctacttatgtggcaccggaaattatagaggaagtcggaatac
ctcttggcaagatgattggtcgactattacaagaaatattcgtctag

Protein
Protein IDpfu_aug1.0_23511.1_40427.t1
Definition-
>pfu_aug1.0_23511.1_40427.t1
MVENEVSIMRKVNHPNIILLVEELDTRDELYLVMEYVKGGDLFDDITMSTKYTEKDASGMIFNLASALKYLHGLKIVHRD
VKPENLLVSMHSDGSKSLKLGDFGLATYCEETLYTVCGTPTYVAPEIIEEVGIPLGKMIGRLLQEIFV

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