Gene
| Gene Model ID | pfu_aug1.0_23540.1_04307 |
|---|---|
| Locus | scaffold23540.1 : 26036 ... 29642 : + |
| To GenomeBrowser | scaffold23540.1:26036..29642 |
| Genes list of scaffold | scaffold23540.1 |
| Synonym | pfu_aug2.0_504.1_14242 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23540.1_04307.t1 | 1 | 1 | CECR6_TMEM121 | 8 | 172 | 4.3e-40 | 137.4 | 6.44597e-44 | 4.79999e-40 | 137.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23540.1_04307.t1 | gi|156362500|ref|XP_001625815.1| | predicted protein [Nematostella vectensis] | 1.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_23540.1_04307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23540.1_04307.t1 atgttccacgacttcacttggaaacttgacgaaaatgacgtgttcggaccgaatacgttaaaaattgcaatatcttttgc tgccattattttccttcttttactctccagtcatcatgatgctgagtctgactcgcatagaaaacactatatttcagaaa tcaccgctaccgttgtatttgatattctagactctgtcgacagcttggatattttgttcgaaaaagatgatattgatgat cttccagctggaatgagtcttgccatcatttgtatctcatgtgtcaattttatcatcccagttttacctttgatgactct gagtcaaactcatttcggtcacaaaccaagttcagagcatatcgtaatgctacataaattatcactcgtctttcttgtca atttaccgttgttcattttcagaatgctagtgtggcatagccttagtaaggaaatatccatttttccggtgaaaaacgta atcataatgggtcttgtgttccatgatctgtacgagaaacaaagagaaaaagtaaggcggcgacagcaatcgcaggatta ttatgacgcaggggaaatgagagatttaacggatactaacaaaccctccaaagcattttcagatccacagtaa |
|
Protein
| Protein ID | pfu_aug1.0_23540.1_04307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23540.1_04307.t1 MFHDFTWKLDENDVFGPNTLKIAISFAAIIFLLLLSSHHDAESDSHRKHYISEITATVVFDILDSVDSLDILFEKDDIDD LPAGMSLAIICISCVNFIIPVLPLMTLSQTHFGHKPSSEHIVMLHKLSLVFLVNLPLFIFRMLVWHSLSKEISIFPVKNV IIMGLVFHDLYEKQREKVRRRQQSQDYYDAGEMRDLTDTNKPSKAFSDPQ |
|