Gene
| Gene Model ID | pfu_aug1.0_23540.1_04308 |
|---|---|
| Locus | scaffold23540.1 : 31089 ... 43975 : - |
| To GenomeBrowser | scaffold23540.1:31089..43975 |
| Genes list of scaffold | scaffold23540.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23540.1_04308.t1 | 1 | 1 | Pkinase | 14 | 109 | 9.2e-14 | 51.2 | 1.5e-17 | 1.1e-13 | 50.9 |
| pfu_aug1.0_23540.1_04308.t1 | 2 | 1 | Pkinase_Tyr | 25 | 65 | 1.7e-08 | 33.9 | 6.0e-12 | 4.5e-08 | 32.4 |
| pfu_aug1.0_23540.1_04308.t1 | 2 | 2 | Pkinase_Tyr | 140 | 164 | 1.7e-08 | 33.9 | 0.097 | 720.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23540.1_04308.t1 | gi|47227253|emb|CAF96802.1| | unnamed protein product [Tetraodon nigroviridis] | 8.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_23540.1_04308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23540.1_04308.t1 atgagttgcccatggttaaaggaatacaccttacgattttcaaggttacttgagttaaatcaaagtaaagcagaaagttt tgttggaactccagcatacatgagtccagaactcttcaaacatcttccatacaatcataaatcggacatatggagctttg gatgctgctgctatgagatggttgcattgaagaaagccttcggcagtgatgagggactgtttgccttgtgtaaaaaagtc tgcagctctgagtatgttttaggacatttgagaaaagttcttgggaaatatgttccatttgacaggaaacaaacagcaga atcggtaaagggtgttatggctttagttggctcacaagaaaatgaatctgtttgcatggaccttattgcacaaattcagc ttgaacttgcggtagaacttggaggagagaatttccagagatgtcatgaagccatgtgtgctgtaaaagatgatcagata gtcaaggcattgctagtggaaataattggtcaaacaaagtttgatcaatgtaaggaaaaattttccttcctaagagagct ggagttgaattctcaagcacagtaa |
|
Protein
| Protein ID | pfu_aug1.0_23540.1_04308.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23540.1_04308.t1 MSCPWLKEYTLRFSRLLELNQSKAESFVGTPAYMSPELFKHLPYNHKSDIWSFGCCCYEMVALKKAFGSDEGLFALCKKV CSSEYVLGHLRKVLGKYVPFDRKQTAESVKGVMALVGSQENESVCMDLIAQIQLELAVELGGENFQRCHEAMCAVKDDQI VKALLVEIIGQTKFDQCKEKFSFLRELELNSQAQ |
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