Gene
| Gene Model ID | pfu_aug1.0_236.1_65317 |
|---|---|
| Locus | scaffold236.1 : 78044 ... 97885 : - |
| To GenomeBrowser | scaffold236.1:78044..97885 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug2.0_122.1_06981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_236.1_65317.t1 | 1 | 1 | Topoisom_bac | 55 | 468 | 0.0 | 336.8 | 0.0 | 0.0 | 336.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_236.1_65317.t1 | gi|224071878|ref|XP_002199057.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_236.1_65317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_236.1_65317.t1 atggatgacggagttgaattattcacagctccaacacagaaaaaagaagctacagaaaagttgcatatgccaaattttct ttcaaaggagactgtgtaccgtgccaagtttagtgcaataacagacaaggatattaaaaatgcaatgaatcatctagtat cacccaataagaatgaagctttgtctgtggacgccagacaggaacttgaccttagaataggctgtgccttcactcgatat cagactaaatatttccagggtaaatatggagatttagacagcacgttgatatcatacgggccatgtcagacccccaccct gggattctgtgtagatcgtcatgataagatccagtccttcaaacctgagccattttggattatacaagtgcagataacag ctcctggaggacgtaatgtatttctggactgggacagagtgagatcgtttgacaaagaggtcgctcacatgtttatgaac cttatcaaggcttctgacaatgccagggttctaaggacagtacaggaagagaaatctaaatcacgtccacaagctcttaa cactgtggagatgttgagggcagctagctcagggctaggtatgggtcctcagcacgccatgcagatagcagagagactgt atacacaaggattcatcagctacccaaggacagaaactacacaatatccagaaaactttgatctggtggggacactcagg cagcagtcatctaactcagtatggggagactatgtcagagaacttcttaacgctggtattcagaaaccaaggaagggaac agatgcaggtgaccatccacccattacacctatgagatccgccactgaagcagagcttggtcatgatgcttggagactgt atgatttcattacaaggcatttcataggaactatatcaccagactgtaagtatactcagacaacagttttctttgagatt ggggtggagaagtttacatgcactggtaacagaatagtggatccaggatttacagatgttatgccatggaaaggattaag taatgatgagacattaccagattttaagagagaagaactgtgtccagtcagtgaggtaaaactggttgagagacagacaa gccctcctgactacctgacagaaagtgaacttataagtctaatggaaaagaacggcatcggcactgatgccagtatatct gtacatataaacaacatatgtgagagaaactacgttaatgtcataggagggcggagactgaaaccaactcccctgggtat agtgctggtacatggttatcaaaaaatagatcaggagttagtgctgtcttccatgcgatctgctgtggagaagcagttga atctcattgccttgggtaaggcatattatgaggatgtcctacaacatgcgctggatattttttgtcgtaaatttaagtat tttgtggaaagcataggagggatggatgaattgtttgaagtgacattttccccattagcagcaacaggcaaacctctttc aagatgtggtaaatgtcgaaggtttatgaagtttgtgatggctaagccatgccgtttacattgctctaattgtgatgaga catactcactgcctcagaatggtaacattaagctatacaaagaactcaagtgtcctctagatgactttgaactggtacta tggactacaggtgtaagagggaagagttttcctctttgtccttactgttacaacaatcctccctttcaagatatgaggaa gcagtttgggtgtaaccagtgtacacaccctacctgtcagcatggactgaatcataatggtgtatcagaatgtgtggagt gtgagggcggggtactggtgttagatacaacatctggacctaaatggaggatggcctgtaataaatgtcaagtggtgatc aatttctttgacaatgcgcatagagtgggtgtgtccgaggagatttgtgacgattgtggagctcatgtagtggatgtgga ctttagcaagggtaaatcaccattagaggacggcaatacagagcattcaggttgtgtattctgtgatgctatattcaaac cactagtcgagaagcatcatgccataatacgccgtagaggtggaggacgagcgggtagaggggggaggggcaggggaagg gggcgtggtcgaggcaggggaaggtccaaaccaaaggacaaaatggcacagctggcagcttattttgtgtag |
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Protein
| Protein ID | pfu_aug1.0_236.1_65317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_236.1_65317.t1 MDDGVELFTAPTQKKEATEKLHMPNFLSKETVYRAKFSAITDKDIKNAMNHLVSPNKNEALSVDARQELDLRIGCAFTRY QTKYFQGKYGDLDSTLISYGPCQTPTLGFCVDRHDKIQSFKPEPFWIIQVQITAPGGRNVFLDWDRVRSFDKEVAHMFMN LIKASDNARVLRTVQEEKSKSRPQALNTVEMLRAASSGLGMGPQHAMQIAERLYTQGFISYPRTETTQYPENFDLVGTLR QQSSNSVWGDYVRELLNAGIQKPRKGTDAGDHPPITPMRSATEAELGHDAWRLYDFITRHFIGTISPDCKYTQTTVFFEI GVEKFTCTGNRIVDPGFTDVMPWKGLSNDETLPDFKREELCPVSEVKLVERQTSPPDYLTESELISLMEKNGIGTDASIS VHINNICERNYVNVIGGRRLKPTPLGIVLVHGYQKIDQELVLSSMRSAVEKQLNLIALGKAYYEDVLQHALDIFCRKFKY FVESIGGMDELFEVTFSPLAATGKPLSRCGKCRRFMKFVMAKPCRLHCSNCDETYSLPQNGNIKLYKELKCPLDDFELVL WTTGVRGKSFPLCPYCYNNPPFQDMRKQFGCNQCTHPTCQHGLNHNGVSECVECEGGVLVLDTTSGPKWRMACNKCQVVI NFFDNAHRVGVSEEICDDCGAHVVDVDFSKGKSPLEDGNTEHSGCVFCDAIFKPLVEKHHAIIRRRGGGRAGRGGRGRGR GRGRGRGRSKPKDKMAQLAAYFV |
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