Gene
| Gene Model ID | pfu_aug1.0_236.1_65318 |
|---|---|
| Locus | scaffold236.1 : 99926 ... 125720 : + |
| To GenomeBrowser | scaffold236.1:99926..125720 |
| Genes list of scaffold | scaffold236.1 |
| Synonym | pfu_aug2.0_122.1_06982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_236.1_65318.t1 | 1 | 1 | MCM | 328 | 631 | 0.0 | 351.4 | 0.0 | 0.0 | 350.4 |
| pfu_aug1.0_236.1_65318.t1 | 2 | 1 | Mg_chelatase | 368 | 396 | 4.5e-10 | 39.0 | 9.6e-05 | 0.24 | 10.5 |
| pfu_aug1.0_236.1_65318.t1 | 1 | 1 | AAA_5 | 372 | 492 | 7.1e-10 | 38.7 | 9.4e-13 | 2.3e-09 | 37.0 |
| pfu_aug1.0_236.1_65318.t1 | 2 | 2 | Mg_chelatase | 418 | 512 | 4.5e-10 | 39.0 | 2.7e-09 | 6.6e-06 | 25.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_236.1_65318.t1 | gi|115772411|ref|XP_785765.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_236.1_65318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_236.1_65318.t1 atgctcaacatggtgctctattatgttgtacaaagatatgcagagaaacatcacaaagctgacttggttaggattttatt ggaagaggacgataatgaccattactccatctctttgcatgcactaacattatttgagtacagtatggtgacatgtgacc tattattgaccagacctgaccaggctctacctatgtttgatgtggcactggctgaggctcagagtgttgtcatggaaaca catgtagaaaaagatgatatggtatatagtatacatgtgaaggtacagtacacatctttaaacatgtatattgtaagtgt agtatactgtaaacatttgaaggtacagtacacatctttaaacatgtacgtatattaaatggaagattctgattgtcgca gaaatattgttgatacctgcatcaacagaaactggaagtacgctcttggcaacgtcataagtactgtaatccggaccact gtagtacgtatgctagaatatgagagagagtacatatgtaccaagtgtagaaatgtcttctctgtgcaggctgattttga acaatactacagtgtatgtaagccaaacaaatgcagcaacgagacttgtaattcgacatcttttacatccctcagtgaca caggttgtcagccacaaaaatgcaggaattatcaggaaatcaagattcaggagcaggttcagagactagctccaggtaca ataccacgatctatatgggttgtactagatgatgaccttgtagacacttgtaaggctggagatgatgttattatatgtgg catcataaagagaaggtggcgaccgacttctatagacgctaagtgtgatatagaggtagtcatgcaggctaaccatgtac aggtcactaatgaacagaggaacattgttctggtcactcaggaattgagaaatgagatcaccaagttttgggaggatcat aagctgaatccgctttctgggagaaatgagatattggccagtctgtgtccacaggtatatggactgtatgtggtcaaact ggctgttgccatggtactagcaggtggtgttcagagggttgatgagacaggtaccagggtgagaggagaagttcacatgc tgttagttggagatccaggcacaggaaaatcccagttcctgaagtatgccagtaagattacaccacgatcagtattaact acaggaataggaagtactagtgctggacttactgttacagctgtaaaggatggaggagaatggcagttagaggctggtgc cttggtgttagctgatggaggactttgttgtatagatgaatttaacagcatcagagagcatgataaagctagtatacatg aagctatggaacaacaaaccatcagtgtagccaaggctggcatggtgtgtaaactagatactaagacaaccatactggca gctaccaatcctaaaggtcactacgaccctaatgagtcactttgtgtgaatgtagccctggctagtccattgttgagcag gtttgatttggtactggtactgttggattctcagaatgaggactgggacagggtggtatctagctttattctggaaaaca aggacccacttggtgagatagacccaaagtccctgtggggaatggagaagatgcaggcctatctgtctcttataaagacc atcaatccagaacttacagaggattctataagggttttaagtcagtactataaggcacaaaggggggcagatgagaggaa cgccgccagaacaacaatgaggctgctacaaagcatgatacgactggctcaagctcatgccagatttatgttccgggagg aagtaacagtagaagatgctgttgttgctgtcactatgatggaatcatctatgcagattggaatttatgaaggtcacttg tga |
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Protein
| Protein ID | pfu_aug1.0_236.1_65318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_236.1_65318.t1 MLNMVLYYVVQRYAEKHHKADLVRILLEEDDNDHYSISLHALTLFEYSMVTCDLLLTRPDQALPMFDVALAEAQSVVMET HVEKDDMVYSIHVKVQYTSLNMYIVSVVYCKHLKVQYTSLNMYVYXMEDSDCRRNIVDTCINRNWKYALGNVISTVIRTT VVRMLEYEREYICTKCRNVFSVQADFEQYYSVCKPNKCSNETCNSTSFTSLSDTGCQPQKCRNYQEIKIQEQVQRLAPGT IPRSIWVVLDDDLVDTCKAGDDVIICGIIKRRWRPTSIDAKCDIEVVMQANHVQVTNEQRNIVLVTQELRNEITKFWEDH KLNPLSGRNEILASLCPQVYGLYVVKLAVAMVLAGGVQRVDETGTRVRGEVHMLLVGDPGTGKSQFLKYASKITPRSVLT TGIGSTSAGLTVTAVKDGGEWQLEAGALVLADGGLCCIDEFNSIREHDKASIHEAMEQQTISVAKAGMVCKLDTKTTILA ATNPKGHYDPNESLCVNVALASPLLSRFDLVLVLLDSQNEDWDRVVSSFILENKDPLGEIDPKSLWGMEKMQAYLSLIKT INPELTEDSIRVLSQYYKAQRGADERNAARTTMRLLQSMIRLAQAHARFMFREEVTVEDAVVAVTMMESSMQIGIYEGHL |
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