Gene
| Gene Model ID | pfu_aug1.0_2360.1_66284 |
|---|---|
| Locus | scaffold2360.1 : 9036 ... 16778 : + |
| To GenomeBrowser | scaffold2360.1:9036..16778 |
| Genes list of scaffold | scaffold2360.1 |
| Synonym | pfu_aug2.0_281.1_03946 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2360.1_66284.t1 | 4 | 1 | RVT_thumb | 6 | 22 | 5.0e-07 | 29.1 | 0.00012 | 0.61 | 9.6 |
| pfu_aug1.0_2360.1_66284.t1 | 4 | 2 | RVT_thumb | 184 | 201 | 5.0e-07 | 29.1 | 0.45 | 2200.0 | -1.8 |
| pfu_aug1.0_2360.1_66284.t1 | 4 | 3 | RVT_thumb | 289 | 315 | 5.0e-07 | 29.1 | 3.5e-05 | 0.17 | 11.4 |
| pfu_aug1.0_2360.1_66284.t1 | 4 | 4 | RVT_thumb | 396 | 414 | 5.0e-07 | 29.1 | 0.02 | 100.0 | 2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2360.1_66284.t1 | gi|301614961|ref|XP_002936954.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2360.1_66284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2360.1_66284.t1 atgctgaagtactgttgtacagtacgggagattcagagattgtctggtgatatatcatggcgaacatatgatgagaactt tcggcgtctccgccaatcaatgaatcttccatggcaaaagcctattgaagaattaagaacgcgggcaacaacttcacaag gtcagaaattgaaaaataatgagccctttcggaatggaaggcaaagtggacgaaaaggaaaggtctgctttgccttcaat agaaacgaaaaatgagttgttccaaaagcagattcaggaaaatttcgagtaatacgtgacctttcattcccaagagagaa ttcggtaaatctgaacattcctcctgaaaactctaaggttcaatatgattctgtcgacagtgttaaaaacttagttcaag aatttggtcaaggcagtttgatggcaaaaactgacatacaagatgctttccgcatcattccaatccacccagatgaccat catcttcttggattttcttggaaaggaaactatttttatgacaggtgtttaccaatgggtgcaagcagctcatgtcagat ttttgagaaattgagttgtgccttgcagtggattctccaatataagtttaatgcatcgggaatttcacatattttggatg attttcttttcattgcgagtcctcacagttcaaaatgcaaggacgatttggtaaattctctccttttatgctcccgggta aacataccaatcaaaatggagaagccagtcctccctaccacttgtcttactatctatggtattgaagttgatactgtaaa gatggaatgtagattacctctctccaaagttgaaaacattcgtacgaaactttctgacttcgaaaatagacacagagcta ctcttcgggaaattcaatctttaattggtctcctgaattttgcatgctctatcataattccaggtcgagctttcctacga cgcttgataaatcttacatgcaaagtcacaaatccattccactttattcggatgaacaaagattcccaagaggatataga aatgtggaaacagttcatagacaatttcaatggaaaatctgtctttttgtccaaatattggttgccatctgatcagttaa cactctatattgatgcatcaggttccattgggtttgctgcagtgtttgagaaggaatggtttgctttgaattggacagaa tctcttttggaatatcagattgccatcaaggagttgtgtcccattgttttagctatggaagtatggggtcatctttcaca aataagaaaatctttcttatgtctgacaatcaagcagttgttgaaataa |
|
Protein
| Protein ID | pfu_aug1.0_2360.1_66284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2360.1_66284.t1 MLKYCCTVREIQRLSGDISWRTYDENFRRLRQSMNLPWQKPIEELRTRATTSQGQKLKNNEPFRNGRQSGRKGKVCFAFN RNEKXVVPKADSGKFRVIRDLSFPRENSVNLNIPPENSKVQYDSVDSVKNLVQEFGQGSLMAKTDIQDAFRIIPIHPDDH HLLGFSWKGNYFYDRCLPMGASSSCQIFEKLSCALQWILQYKFNASGISHILDDFLFIASPHSSKCKDDLVNSLLLCSRV NIPIKMEKPVLPTTCLTIYGIEVDTVKMECRLPLSKVENIRTKLSDFENRHRATLREIQSLIGLLNFACSIIIPGRAFLR RLINLTCKVTNPFHFIRMNKDSQEDIEMWKQFIDNFNGKSVFLSKYWLPSDQLTLYIDASGSIGFAAVFEKEWFALNWTE SLLEYQIAIKELCPIVLAMEVWGHLSQIRKSFLCLTIKQLLK |
|