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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2366.1_30076
Locus scaffold2366.1 : 39485 ... 48555 : -
To GenomeBrowser scaffold2366.1:39485..48555
Genes list of scaffold scaffold2366.1
Synonym pfu_aug2.0_4479.1_32672

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2366.1_30076.t1 2 1 EGF 28 36 4.2e-07 29.8 0.51 1900.0 -1.1
pfu_aug1.0_2366.1_30076.t1 2 2 EGF 49 77 4.2e-07 29.8 1.1e-10 4.2e-07 29.8

Transcript
Transcript IDpfu_aug1.0_2366.1_30076.t1
Definition-
>pfu_aug1.0_2366.1_30076.t1
atgtttttctttcagtgcgaatttttcagagaatggcagtgtcgcgaaaagtcttgctatccggggaccaattgtgccac
attgaatgatgccaattgcgtcagactgaagtactacactgtatattgcaaagatgtcaatgaatgtagctcaaatcctt
gtcgcaatggcggaacatgccacaatggaaataaccggtttacatgttcatgtgatcctcacttctacggaacaacatgt
cagagcgacgcaattaatcagccgtaa

Protein
Protein IDpfu_aug1.0_2366.1_30076.t1
Definition-
>pfu_aug1.0_2366.1_30076.t1
MFFFQCEFFREWQCREKSCYPGTNCATLNDANCVRLKYYTVYCKDVNECSSNPCRNGGTCHNGNNRFTCSCDPHFYGTTC
QSDAINQP

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